Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1414 ATGGAATATGGTGCCCTAGTACACAATAGTTCTGCATTTGAGACCTTATCAGACAGTACCGCCTCAATTTCAGAAAGGGATTCCCTTGACGAGATCTTTGCACATGGTTGTTGGCTGGAAACCACTGGAGGATCATACAACCTCACGCAGCCTTGTTCTACGAATCCTCCTTCTCTCAATGACCCCAATTTGCAGTTGCACTATTGGACTTCCTCAGACCCAAATCACCACATCTATCAACAAGAATCAGAGGTAAGTTTTCACTTCGAAACCGAAACTGAAGTGGGAAAAAGGTGGTGGATTGGACCAAAGGCAAATCCTGGCTCATCTTCCTCGGTCAAAGAAAGATTAGTGCTTGCCGTGGGATACTTGAGAGAATACACGAAGAATACCAACGTGTTTCTTCAGATATGGGTGCCCCCTAGGAGAGAGGGAACATACGTTCTAACCAGTGCTCACGATCACGCTCCCCCACACCCATCCGTTGATGATCCGAACTGCAAGACTCTTGAATATTACCGAAATGTTTCCAAAGGTTATCAGTTGGCCGCCGAGGAGGAAACGGAGGAGTGTCGAGTAATCGTAGGAAAATTGCCTGATCAGTGGACCCCCACTATTCGGTTTTTCAAAAGCCACGAGTATGTTTCATATGTAAATTATGCGCAGCAGCACTACGATTTAAGTGGATCGTTGGCCCTTCCAGTGTTTGAGCGAGGCAGCGGGACATGCCTCGGCGTTGTTGAGATTCTAATGACCAATCACAACATCAACTATCACCCGCAAATTGACAATGTCTGCCATTCTCTCCAGACTGTTGATTTTAACAAGAGCACGACTTGTCAGAACCTTATTGCTCCGGCTGTGAAGGTATTTGACGAGTTGTACCTAGCTGCACTAAATGAGATTGTAGAGGTGTTAACGTCTGTGTGCAAGACCCATAATTTGCCTTTAGCTCTCACTTGGGCGCCCTGTGGCCAACAAGGTAAGGGCGGATGTCCCAACGACAATTTCGTGGCTTGTTTGTCCACTGTGGATTCTGCTTGCTTCGTGGCGGATTTAGATTTGCTTGGCTTCCAAGAAGCCTGCTCTGAGTACCACCTTCTTCGAGGGCAAGGCATTGTTGGCACCGCCTTCACCACTACCAAGCCATGCTTCGCAACCGACATAACTTCCTTCAGCAAAACTGAGTATCCTCTGGCTCACCATGCCACCATGTTTGGGTTGCATTCCGCCGTCGCTATTCCCCTCCGCAGTGTCTACACTGGATCCGCCGACTTTGTGTTGGAATTTTTCTTACCCAAGAATTGCCATGACGGCGAAGAACAGAAACAGATGCTGAATTTATTATGTATTGAGGTACAACAGGCTTGCCGGAGTTTACACGTTGCCCTGGACAAACAGATGGAGGAAGAATTCACTTTTACAGTTGGAGATATGTTGGCAGCGGCTTCCAAAGACGGAGCCCACAAAGAAGAAACTCTTGAGTTTGGGTCTTGTAATTTTGAAGAAGCGTCTTCAAAAGAATCGTCGTGGATTGCCCATATGATGGAGGCTCAAACCCAACACAAGGGTAAAGGCGTGTCAGTGTCGTTGGAATACCTGGAAGAACCAAAACAAGAGTTCAAAGTGACAACCAACTGGGAAGCTACCCACGGGGGATTCTGCAATGGGCAGACATTTTCAGATTATGGACAAGTTCACCCGAGCTCTGCTGCATCCAGAGCGAGCGTAGAGGGTGGAGGGGAATCTTATGCTTTTGGTGGACGCCGCTCGTCAGGTGGCAGAAAATCAGGCGAGAAGAGACGAACGAAGGCCGAGAAGACCATCAGCTTACCAGTTCTTCGACAATACTTTGCGGGAAGCCTTAAAGATGCTGCCAAGAGCATCGGCGTGTGTCCCACGACTCTTAAAAGGATATGCAGACAACATGGAATTACCAGATGGCCTTCAAGGAAAATAAAGAAGGTAGGACACTCGTTAAGGAAACTTCAGCTTGTGATCGATTCAGTACAAGGTGCTGAGGGCGCCATTCAGATCGGTTCCTTCTACTCCAGTTTTCCAGAGTTGAGCTCCACAAATTTTTCTCAATCATCAAACATCAGCGACCATTCTAAGAAAGTGCATGCTCGTCCCGAGCACGGGTTATACAGACACGGCGGCCCAACATTAAAATCTCCACCCTCTTCTTGCAGCCAGACTTCCACCATCATCAACGATGTTTTAATGGCAGAAAACCCAGAAGCGTCGCTCAAGAGAGTTCATACTCACTTGGAAGCAGAGTTGCATGAGGATACAAAGCAGCAGAAAGCACTTGGCGAGCATCCTAGTGCGGAGGTTTTACCTCCGCTGCCTGAAAACAGTGGCGGTGCTTTTAGGGTGAAAGCTACTTTTGGGGATGAGAAAATTCGTTTTAGCTTGCAATCGAATTGGGGGTTTAGAGAACTACAACTGGAGATCGCAAGACGATTCAATCTAGATGATGTGAGCAACATCGGTCTCAAGTATTTGGATGAGGAGGGTGAGTGGGTTCTTTTAGCTTGCGATGCTGATCTTGAGGAGTCTAAAGACACATATAGATCATCAAAGAGCCGTACAATGAGGTTCGCCCTGTTTCAAGCTTCGCCACTAAATCTAGCCAACACTTTTGTCAGCAACAGCTCATCATGA 2667 0.4736 MEYGALVHNSSAFETLSDSTASISERDSLDEIFAHGCWLETTGGSYNLTQPCSTNPPSLNDPNLQLHYWTSSDPNHHIYQQESEVSFHFETETEVGKRWWIGPKANPGSSSSVKERLVLAVGYLREYTKNTNVFLQIWVPPRREGTYVLTSAHDHAPPHPSVDDPNCKTLEYYRNVSKGYQLAAEEETEECRVIVGKLPDQWTPTIRFFKSHEYVSYVNYAQQHYDLSGSLALPVFERGSGTCLGVVEILMTNHNINYHPQIDNVCHSLQTVDFNKSTTCQNLIAPAVKVFDELYLAALNEIVEVLTSVCKTHNLPLALTWAPCGQQGKGGCPNDNFVACLSTVDSACFVADLDLLGFQEACSEYHLLRGQGIVGTAFTTTKPCFATDITSFSKTEYPLAHHATMFGLHSAVAIPLRSVYTGSADFVLEFFLPKNCHDGEEQKQMLNLLCIEVQQACRSLHVALDKQMEEEFTFTVGDMLAAASKDGAHKEETLEFGSCNFEEASSKESSWIAHMMEAQTQHKGKGVSVSLEYLEEPKQEFKVTTNWEATHGGFCNGQTFSDYGQVHPSSAASRASVEGGGESYAFGGRRSSGGRKSGEKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLRKLQLVIDSVQGAEGAIQIGSFYSSFPELSSTNFSQSSNISDHSKKVHARPEHGLYRHGGPTLKSPPSSCSQTSTIINDVLMAENPEASLKRVHTHLEAELHEDTKQQKALGEHPSAEVLPPLPENSGGAFRVKATFGDEKIRFSLQSNWGFRELQLEIARRFNLDDVSNIGLKYLDEEGEWVLLACDADLEESKDTYRSSKSRTMRFALFQASPLNLANTFVSNSSS 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1414 888 MobiDBLite consensus disorder prediction 582 605 - -
Lele45g1414 888 SMART PB1_new 790 873 IPR000270 GO:0005515
Lele45g1414 888 CDD PB1_NLP 791 872 IPR034891 -
Lele45g1414 888 Gene3D - 789 875 - -
Lele45g1414 888 ProSiteProfiles RWP-RK domain profile. 595 676 IPR003035 -
Lele45g1414 888 PANTHER PROTEIN NLP8 52 876 IPR045012 GO:0003700
Lele45g1414 888 Pfam RWP-RK domain 609 656 IPR003035 -
Lele45g1414 888 ProSiteProfiles PB1 domain profile. 790 873 IPR000270 GO:0005515
Lele45g1414 888 Pfam PB1 domain 791 872 IPR000270 GO:0005515
Lele45g1414 888 Gene3D - 357 431 IPR029016 -
Lele45g1414 888 SUPERFAMILY CAD & PB1 domains 784 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1414 Lele-ChrLele45 23564554 23567687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1414 10 884 NLP Transcription Factor Family AT4G35270 44.652 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele45g1414 PB1 6.1e-17 CL0072