Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1396 ATGGGCGATCTCCAACTGCCGGGCTTCCGATTTCACCCCACCGATGAAGAACTCCTTGATTTCTACCTTAAGAATATGATCACCGGCACCGGCGACAAACTCTGCCTCGACGTCATCCACTTCCTCAACATCTACCTCCACGATCCCTGGGATTTACCCTCCATGGCCCACGTTGGCGAAAGAGAGTGGTACTTCTTCGTCCCCCGAGATAAAAAGCACGCCGGCTCCGGCAGGCCTAACCGTACCACCCAAAAGGGCTTCTGGAAAGCCACCGGCTCCGACCGCAAGATCCTCAGCCTCTCCCACCCCAAGCGCCTCATCGGCCTCCGCAAGACCCTCGTCTTCTACCTCGGAAGAGCTCCCCGCGGCTCCAAGACCGATTGGATCATGAACGAGTACCGCCTTCCCGACTCCTTCAACTTCCCCAACAAGGACGCCATAGTGTTGTGCAAGATATACCGAAAGGCTACATCGTTGAAAGTGCTGGAGGAGAGGGCAGCGCAGTGCGATTCGTCCTCCACCTCCGTGCCCGCCTTCCAGCCCAAGACGGAACAGATGGAAGAGACGGTGCCTGAGCTCAACCTGCCGGAGCTCCAGTTACCAGTGAACACGGGCTGGACCCAAGACCCCTCTTGGCCTCAATTAAACAGCCCTTGGCTCCAATGTTTCACTCCCCTCACCATTTCCAACCTCTTAAATTGTTAA 705 0.5645 MGDLQLPGFRFHPTDEELLDFYLKNMITGTGDKLCLDVIHFLNIYLHDPWDLPSMAHVGEREWYFFVPRDKKHAGSGRPNRTTQKGFWKATGSDRKILSLSHPKRLIGLRKTLVFYLGRAPRGSKTDWIMNEYRLPDSFNFPNKDAIVLCKIYRKATSLKVLEERAAQCDSSSTSVPAFQPKTEQMEETVPELNLPELQLPVNTGWTQDPSWPQLNSPWLQCFTPLTISNLLNC 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1396 234 Pfam No apical meristem (NAM) protein 7 135 IPR003441 GO:0003677|GO:0006355
Lele45g1396 234 Gene3D NAC domain 14 159 IPR036093 GO:0003677|GO:0006355
Lele45g1396 234 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 177 - -
Lele45g1396 234 ProSiteProfiles NAC domain profile. 5 155 IPR003441 GO:0003677|GO:0006355
Lele45g1396 234 SUPERFAMILY NAC domain 6 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1396 Lele-ChrLele45 23456589 23457431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1396 3 227 NAC Transcription Factor Family AT2G17040 52.518 1.10e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele45g1396 NAM 2.1e-33 No_clan