Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1388 ATGGTGGTGAATCAGGCTGACCAGGGCAGCGCTGGTAGAGTGCCCGCTACGTCTTCTACGCCTCAGAGTCGACAGCAGAGTCAGAAGCTCGAAGTGTACCGCGAGGTTCTTCGTCGCCTCAAGAATTCCAACAACGACGAGGCTATGCAGCCTGACTTCGACCATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGATATGCGTTGGATGTTAATGTGGAAAGGGCGGCAGATGTTCTCACGCATAAGAGATTACTGCATTTGGCTCATGACCCTGCTAATAGGCCTGCCATTGAAGTTCGCTTAGTCCAGATTTATCCCACATCTGATGGAAATTCAGCTGACTCCGTCCATTCAGATGTAACTAGGGAAGAAGCTTGTCAAACCTCTCCAAATTACTCAAGGAGACTGAGTATTCATCCTCCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCCCTGGCACTTGAAGCTGATAAATCTGAAGATGAGGAATACTCTGTGCATGGGAGTGATAAATATTCTCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGCTTGCTGAAATTGGTTTAAACATCAGAGAGGCACACGTCTTTTCCACTAGTGATGGCTACTCATTAGATGTGTTTGTTGTTGATGGATGGCCCTATGAGGAAACACAGCAGCTGAAGGCAGCTTTGGAGAAAGAAATATTGTTGATTGAGAGGCATGCATTTCCTACTCAGCAATCAGAATTTTATGTTGGTAAGACTGATCAAGTGGAGATGAAATGTGAAGAAGGTCATTTGGTGATACCGAATGATGGGTCAGACGTTTGGGAAATAGAGCCTAAACATTTGAAATATGGAAATAAAATTGCATCTGGGTCATTTGGTGAACTGTTTAGAGGCACATATTGTAGTCAGGACGTGGCTATTAAAGTTCTCAAGTCTGAGAATATTAGTTCAGATTGGAAGAAAGAGTTTGCTCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAAGAATGTTGTGCAATTTATTGGAGCATGTACCAAGCCACCACACTTTTGCATAATAACAGAATTTATGAGTGGTGGGAGTGTGTATGACTATTTGCATAAGCAGAAGGGTGTTTTTAAATTTCCGTCTCTACTCAGAGTAGCAATTGATGTTTCCAAGGGGATGAACTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCATGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTTATGACAGCAGAAACTGGTACATACCGATGGATGGCACCTGAGGTTATAGAACACAAACCATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTGTGGGAATTGCTCACTGGAAAGCTTCCATATGAATATCTGACCCCACTACAGGCAGCAATAGGAGTGGTTCAAAAGGGCCTACGACCCACGATCCCCAAGAACACACATCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCGACATTAAGACCTGATTTCTGTGAAACTATTGAGATCCTGCAGCAATTAGCTAACGAGGTTGGGAATGATGGGGAGGAGAGGAGAAGGGAGAAATCTGGAGGATTTTTTTCTGCCCTCAGACGAGGTCATGGTCATCCCTGA 1731 0.4339 MVVNQADQGSAGRVPATSSTPQSRQQSQKLEVYREVLRRLKNSNNDEAMQPDFDHQLWGHFNRLPTRYALDVNVERAADVLTHKRLLHLAHDPANRPAIEVRLVQIYPTSDGNSADSVHSDVTREEACQTSPNYSRRLSIHPPPAFGSSPNLEALALEADKSEDEEYSVHGSDKYSQPMHEITFSTDDKPKLLSQLTSLLAEIGLNIREAHVFSTSDGYSLDVFVVDGWPYEETQQLKAALEKEILLIERHAFPTQQSEFYVGKTDQVEMKCEEGHLVIPNDGSDVWEIEPKHLKYGNKIASGSFGELFRGTYCSQDVAIKVLKSENISSDWKKEFAQEVYIMRKVRHKNVVQFIGACTKPPHFCIITEFMSGGSVYDYLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQDPTLRPDFCETIEILQQLANEVGNDGEERRREKSGGFFSALRRGHGHP 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1388 576 CDD ACT_TyrKc 179 246 - -
Lele45g1388 576 Gene3D Phosphorylase Kinase; domain 1 284 372 - -
Lele45g1388 576 Pfam Protein tyrosine and serine/threonine kinase 294 542 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 MobiDBLite consensus disorder prediction 551 566 - -
Lele45g1388 576 MobiDBLite consensus disorder prediction 551 576 - -
Lele45g1388 576 SUPERFAMILY ACT-like 179 243 IPR045865 -
Lele45g1388 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lele45g1388 576 Coils Coil 231 251 - -
Lele45g1388 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 94 550 - -
Lele45g1388 576 FunFam serine/threonine-protein kinase HT1 373 563 - -
Lele45g1388 576 FunFam Serine/threonine-protein kinase isoform 1 284 372 - -
Lele45g1388 576 SUPERFAMILY Protein kinase-like (PK-like) 283 541 IPR011009 -
Lele45g1388 576 MobiDBLite consensus disorder prediction 1 29 - -
Lele45g1388 576 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Lele45g1388 576 SMART serkin_6 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1388 576 Gene3D Transferase(Phosphotransferase) domain 1 373 563 - -
Lele45g1388 576 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Lele45g1388 576 CDD STKc_MAP3K-like 300 543 - -
Lele45g1388 576 ProSiteProfiles Protein kinase domain profile. 294 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1388 Lele-ChrLele45 23411730 23418048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1388 1 573 MAP Kinase Kinase Kinase AT4G35780 64.076 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele45g1388 PK_Tyr_Ser-Thr 5.7e-74 CL0016