Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1380 ATGCTTGCGTGCGGAAGAATCGCATTTCCACCGTGCTTACCAAAAGCTAGGAGGAACCCAAGAGTGTTTTGCGTAGCTGAACCTCCACAAGGCTATTCCAATGAAGGACACAGTGGCAAAAAGAAAGTAGTAATCGTCGGCTCTGGCTGGGCTGGCCCTGGAGCTGCTCATCACCTCTGTAATCAGGGTTTCGACGTCACTGTTCTTGAAGGCGACAACGGTTTTGGAGAACCTGACACTACACCAATTCGGGATAGAGTTTCCAATATTTCAAGATTTGCCTTGATTGCCTACTCCGTTGGGAACCTTATACTACGGCCAATGATTGACTTTGACAACCTCGACACAGCCTGGGGGAAATATGATTCAAGCCCGTTGGTTCATGTGGGTCTTTTTGCTCCAGCAGAGCAATGTAGTGCTGCTGCAACACTGGGACTGCTAAATTTTATTACCCTTGCTCACCAGATTTTGATATGGCATGGCCTCGTGGAGCTAGGTAGTTTGTGGCAAGACGACCTACAAAGCCGATGCAGTGATTATGGCAGGGCAATTTCTACTCTACAAGAGATTATACAGAACAGCCCAACATTATGTTCAAGGGAGGACTTTCTGAAGGTTCTGAACTTGGGAAGCATTGATGTTCTCACTGTTAAACTTTGGCTTGACCAAAAGGTGAAGATTCCTGCTGCTTGCAATGCTTGCTCTGGGTTTGACAACTCATTTGCGTGGACATTCTTTAACTTGGATGTCATTCAAGATGAGCATCAATGTGATTCTATGACAGTTATGCAAGCTGACTTTTTAAGTTTGTTGCCGCTGAAGGATGAGCAGATGGTTGTGAAATTGAAGTCTTACCCCAATTATATTAAAGAGTTTGAGAATGCTAGCGTGGTTGATAAAGAGATTAGTAGATATCCCAAATCTTTGACCCAGTTCTTCCCAGGTTCATACAAGAACGCGATGCGTGCGTCCACATCTTTCCCAAACTTGTTCATGGCCGGTGATTGGATTGTGAACCGACACGGCTCATGGGCACAGGAAAAATCTTATGTGACGGGTCTAGAAGCTGCCAATCGAGTGGTGGATTATCTCGAAGAGGGAAGCTTTGCTAGGATTCTACCCGTAGAAGAAGCTGAACCATATATTCAGACTCTTCGGAGAAGAGATGTTGTGGATGCATATCTTGTGTCTTTTACTGGACAGCCACCGAGTCAAACTTCAAACTCAACCAGAGATTCCCATTCTCAGAAGCCTGATATTGAGATCAACACATCATTACACAAGGATAAATTATGGTTAACATTGTGCCAGCGACACGTGCTCGACAACTCCGCTCATGTGGTCCTGTCACGGACTCACGGGGTCTCAGAGGATCAAACGAGAAACGGCCGTGACCTGAACATCAGCATCCAAGGTGGCGCCTTGCATCGCCGCGTCTCCGTTCTCTCCACCGCGCCATTAAACGCCTTGCCATTAATTGCTCCGTGTACTGCCCGTGTGTTATTAGGTTCATCATTAGATCTCAGTTCCATCCCTACTCTCTGTCAATATCTCTCTTGCGCTTCAGATCAGAGGAAAAAAGAGAAGAGTTCAAACATGGGGGGGGCTCAAAACAGTCTTGATTTGGAGGAGGGAACTTTGGAGATAGGAATGGAATACAGAACTTTATCTGGTGTTGCTGGACCATTGGTGATTCTCGACAAAGTTAAGGGACCCAAATATCAAGAGATCGTAAACATTCGTTTAGGAGATGGAACTACTCGACGAGGGCAAGTTCTAGAAGTTGATGGCGAAAAGGCTGTTGTTCAGGTTTTTGAAGGCACATCTGGGATTGACAATAAATTTACAACTGTGCAGTTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTGGACATGCTTGGACGCATATTTAATGGTTCTGGAAAACCTATTGATAATGGTCCACCCATATTGCCTGAGGCCTACTTGGATATATCAGGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACGGGAATATCTACAATTGATGTCATGAATTCCATTGCTAGAGGTCAAAAGATCCCTCTTTTCTCAGCGGCTGGTCTTCCTCATAATGAAATTGCTGCTCAGATATGTCGCCAGGCTGGCTTAGTCAAGCGATTGGAGAAGACTGATAATCTTCTTGAGGGTGGGGAAGAAGACAATTTTGCCATTGTGTTTGCTGCTATGGGAGTTAATATGGAGACTGCACAATTTTTTAAACGTGACTTTGAGGAGAATGGCTCAATGGAGAGGGTGACTCTGTTTCTTAATCTGGCAAATGATCCAACAATTGAGCGCATTATCACTCCTCGTATTGCTCTAACAACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTTGTGATACTTACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTATCTGCTGCTCGGGAAGAAGTGCCTGGAAGGCGTGGTTATCCAGGATACATGTATACTGATCTTGCAACAATCTATGAACGTGCTGGAAGAATTGAGGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTTACCATGCCAAATGATGATATCACACATCCAACTCCTGATCTTACGGGATACATTACTGAGGGGCAGATATACATAGATAGGCAGCTGTATAACAGACAGATATACCCACCAATCAATGTCCTTCCATCACTATCTCGTTTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGAAGGGATCATTCTGATGTTTCGAACCAGCTCTATGCAAATTATGCCATTGGAAAGGATGTTCAGGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTTTCATCTGAGGATCTGCTGTATCTAGAATTCTTGGACAAGTTCGAGAGGAAGTTTGTTGCCCAAGGAGCTTATGACACCCGCAACATCTTCCAGTCCCTAGATCTTGCATGGACTTTGCTTCGGATTTTCCCCCGTGAGCTGCTTCATCGGATACCAGCAAAGACTCTTGACCAATATTATAGCCGAGACGCTGGTAATTAA 3063 0.4483 MLACGRIAFPPCLPKARRNPRVFCVAEPPQGYSNEGHSGKKKVVIVGSGWAGPGAAHHLCNQGFDVTVLEGDNGFGEPDTTPIRDRVSNISRFALIAYSVGNLILRPMIDFDNLDTAWGKYDSSPLVHVGLFAPAEQCSAAATLGLLNFITLAHQILIWHGLVELGSLWQDDLQSRCSDYGRAISTLQEIIQNSPTLCSREDFLKVLNLGSIDVLTVKLWLDQKVKIPAACNACSGFDNSFAWTFFNLDVIQDEHQCDSMTVMQADFLSLLPLKDEQMVVKLKSYPNYIKEFENASVVDKEISRYPKSLTQFFPGSYKNAMRASTSFPNLFMAGDWIVNRHGSWAQEKSYVTGLEAANRVVDYLEEGSFARILPVEEAEPYIQTLRRRDVVDAYLVSFTGQPPSQTSNSTRDSHSQKPDIEINTSLHKDKLWLTLCQRHVLDNSAHVVLSRTHGVSEDQTRNGRDLNISIQGGALHRRVSVLSTAPLNALPLIAPCTARVLLGSSLDLSSIPTLCQYLSCASDQRKKEKSSNMGGAQNSLDLEEGTLEIGMEYRTLSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAGN 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1380 1020 Hamap V-type ATP synthase beta chain [atpB]. 550 1018 IPR022879 -
Lele45g1380 1020 FunFam V-type proton ATPase subunit B, brain 561 1020 - -
Lele45g1380 1020 ProSitePatterns ATP synthase alpha and beta subunits signature. 900 909 IPR020003 GO:0005524
Lele45g1380 1020 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 538 1017 IPR022879 -
Lele45g1380 1020 Pfam ATP synthase alpha/beta family, beta-barrel domain 557 622 IPR004100 GO:0046034|GO:1902600
Lele45g1380 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 915 IPR027417 -
Lele45g1380 1020 Gene3D - 30 90 IPR036188 -
Lele45g1380 1020 CDD ATP-synt_V_A-type_beta_C 919 1013 - -
Lele45g1380 1020 CDD ATP-synt_V_A-type_beta_N 552 623 - -
Lele45g1380 1020 CDD V_A-ATPase_B 624 911 - -
Lele45g1380 1020 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 679 909 IPR000194 GO:0005524
Lele45g1380 1020 SUPERFAMILY Nucleotide-binding domain 40 369 - -
Lele45g1380 1020 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 552 1018 IPR005723 GO:0033180|GO:0046961|GO:1902600
Lele45g1380 1020 Gene3D - 561 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1380 Lele-ChrLele45 23344340 23356833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1380 531 1020 Primary Pumps ATPases(2) AT4G38510 96.327 0.0 971