Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1378 ATGTTATCACAGTTAATGAACTTTCTGCGGGCCTGCTTGTGGCCAAGTTCCGATCAAAATGCACGTAGTGGTTCAGATGCTGGAGGTCGGCAAGATGGATTGTTGTGGTATAAAGACTCGGGGCAGCACTTGAGCGGTGACTTTTCAATGGCTGTGGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGGTTGAATCGGGCAGTTTGAGCACCAGCGAATCTGGTCCTTATGGTACCTTTGTTGGTGTTTATGATGGGCATGGAGGACCTGAGACCTCACGGTTTATTAATGATAACCTCTTTCATCATCTTAAGTGGTTTGCTGCAGAGCAGCAATCAATGTCGGTAGATGTAATTCGCAAGGCATTGCAAGCAACAGAAGAGGGATTTCTGTCTCTCGTTGCCAGACAGTGGCCAATGAACCCACAAATCGCGGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATGTAGCTAATCTTGGTGATTCTAGGGCTGTTTTGGGAAGAGCGGTCAAGGCAACTGGGGACGTACTAGCCGTGCAATTGTCAGCAGAGCACAATGTGGGGATAGAGTCTGTGAGGCAGGAGATGCATTCTTTGCACCCTGATGACTCACAGATTGTTGTTTTAAAACATAATGTATGGCGTGTAAAGGGCCTTATACAAATTTCAAGATCTATTGGTGACGTTTATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCCAAGTTTCGACTTCGGGAGCCATTCAAGAGGCCGATACTAAGCTCAGAACCATCAATATCAGTGTGTCAATTGCAGCCACACGATCAATTTATTATATTTGCATCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGATGCAGTTGATATAGTTCAAAATAATCCTCATAGTGGAATTGCAAGGAGGCTGGTGAAAGCTGCCCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAGATTGATCGTGGGGTTCGTCGACATTTCCATGATGATATAACTGTGATTGTGGTGTTCCTGGACTTGAATCTCCTGAGTAGGGCAAGCTCTGCGAAGTTCAATAGTATATCTGTTAGAGGTGGTGGCATCAGCCTGCGTCCTAACACACTGGCACCTTGTACGACACCAACAGAGGCTGGTGGTACCTGA 1194 0.4556 MLSQLMNFLRACLWPSSDQNARSGSDAGGRQDGLLWYKDSGQHLSGDFSMAVVQANNLLEDQSQVESGSLSTSESGPYGTFVGVYDGHGGPETSRFINDNLFHHLKWFAAEQQSMSVDVIRKALQATEEGFLSLVARQWPMNPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRAVKATGDVLAVQLSAEHNVGIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVCQLQPHDQFIIFASDGLWEHLSNQDAVDIVQNNPHSGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDLNLLSRASSAKFNSISVRGGGISLRPNTLAPCTTPTEAGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1378 397 FunFam Phosphatase 2C family protein 36 365 - -
Lele45g1378 397 Gene3D - 37 363 IPR036457 -
Lele45g1378 397 PANTHER PROTEIN PHOSPHATASE 38 353 - -
Lele45g1378 397 CDD PP2Cc 48 355 IPR001932 -
Lele45g1378 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Lele45g1378 397 SMART PP2C_4 37 353 IPR001932 -
Lele45g1378 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Lele45g1378 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Lele45g1378 397 Pfam Protein phosphatase 2C 79 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1378 Lele-ChrLele45 23338104 23341020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1378 1 396 PP2C-type Phosphatase Gene Family AT4G38520 75.505 0.0 638