Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1365 ATGTCTTCATTCGTTGGCACTGATGATAGTACTGGTACAGATTCTGCAGAAAAGAAGTCAAAAAAACGTTCTTTTGGTAATCGTGAAGCAGTTCGCAAATATCGTGAGAAGAAGGCCCGAGCTGCATCTTTGAAGGATGAGGTTGTAAAATTGAGAGCTTTGAATCAACATTTGTTGAAGAGGTTGCAAGGTCAGTCTGCTTTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTAGTAGACATTCGAGAAAGGATTGATGGGGAGATTGGATCATTTCCATATCAGAAACAAACTAATTTGGACCTGCCAACTGCACACTCCCCTGGTTCCTATTTGATGAATCCTTGTAATGTGCAGTGCGGTGATCAGGTCTATTGTCTTCAGCTAGGAGCAGATGGCAAGAATACAGAGCATTTATCAACTAACGGGCAAGGAATGAATGGTTGTGAGTTTGAAAGCATCCACTGCCCATCAAACCAGAATTTGGGCCTCGAGGATCTTTCTAGCTGTGGAGTTGGAAAGGAAGTGTCTAATATTAATTTTCCTACTGCAAATAAAAGAAAAGGGCGAACTCGAGCAGCAATGCATCAGCCATCCATCAGGTCCGTTCTATATAATGTTAGATCAAAATCTGCTGGTTATGAACTTAGGGAAGCTGACGTGTTAGCATTCAATATTTTGTGCCGTGGACAGGGAACTTTGCCTCCTAATGGAATGTTTGGTTGGACAAAATTCCAAAACTTGTGGGAGACCGAAGGGAAAGAGACTTGTTTCCAAGTCTTGGGATGTTTGGTTGGCAGTTAG 807 0.4238 MSSFVGTDDSTGTDSAEKKSKKRSFGNREAVRKYREKKARAASLKDEVVKLRALNQHLLKRLQGQSALEAEIARLKCLLVDIRERIDGEIGSFPYQKQTNLDLPTAHSPGSYLMNPCNVQCGDQVYCLQLGADGKNTEHLSTNGQGMNGCEFESIHCPSNQNLGLEDLSSCGVGKEVSNINFPTANKRKGRTRAAMHQPSIRSVLYNVRSKSAGYELREADVLAFNILCRGQGTLPPNGMFGWTKFQNLWETEGKETCFQVLGCLVGS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1365 268 Coils Coil 27 61 - -
Lele45g1365 268 SMART brlzneu 14 81 IPR004827 GO:0003700|GO:0006355
Lele45g1365 268 MobiDBLite consensus disorder prediction 12 37 - -
Lele45g1365 268 MobiDBLite consensus disorder prediction 1 37 - -
Lele45g1365 268 Gene3D - 8 83 - -
Lele45g1365 268 PANTHER CCAAT/ENHANCER BINDING PROTEIN 14 94 - -
Lele45g1365 268 CDD bZIP 27 73 - -
Lele45g1365 268 Pfam Basic region leucine zipper 17 71 IPR004827 GO:0003700|GO:0006355
Lele45g1365 268 Coils Coil 65 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1365 Lele-ChrLele45 23261738 23264112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1365 8 195 bZIP Transcription Factor Family AT2G16770 56.316 5.36e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele45g1365 bZIP_2 2.7e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1365 45 23261738 23264112 Lele47g0047 47 346804 347712 hybridization
Lele45g1365 45 23261738 23264112 Lele48g0050 48 1057522 1059136 hybridization