LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g1364	ATGACCGTTGAGAGGGGAAATGTGTTGGTGGGGATTAGAATCGATAGCCAAAGCAGACAGCTTTTAAACTGGGCTCTTGTCAAAGTTGCTCAACCTGGAGATTGCGTTGTTGCAGTTCATGTGGTCAAATGTTCAGGTCATGTTTCAAAAAACAAGCCCCTGCTGGATAAGTATTTAGAGGTTTATGAGGGCCTATCTGACGTGAAAAAAGTAAGTCTCGAAGGTCAAATCTTCAGAGGGAGATCTGTTCGAAACATTCTTGTGAGAGAGTCAAAGAATAGTTCTGCTCTGGCTCTAGTGGTTGGTGGTGGTGCTGCCACAGCTAAACATTGTGCCAAACGACTCCCACCCACCACAGATGTTGTAGCCATCCACGATGGAAGAATTGTCTTCAGCAGGTGTACCAATCTTACACTACCTGCAGGTCTTATACAAGATCCAAGGCCTAGTCTCACAAGCATGGACGACAAAGAATTCCTATCTGAATATGGAGACTCCGAGGTTGGCACTGTGAAATCAATATGTTATGGAGAGACAAGAGAAGATGTCCCAGAATTTAACAAAGAAGTATTTGAAGGTGTTAAAGGGAGCAAGAAAGTGTGCTCAAGAGCAATATCTATGTTTGTAGGTGATCCTTGTGAGCAGAAACTAGGATGGCCCTTGCTCCGAAGAGTTAATTCAGAAATCATCTCAGAGACTCCTCTTGCAAGGAACATGTCTGTAGTACAGTGGGTAATGAACTTACCAGATCGTTCGCCAAAGAAAGGTTTTTGCTTTTCATCCACAGAAGAAAGTCTCTCAGAAAGAAGCATCAGTGATATTGAGGATCACACACAGAAAAACAATTCCTTTTCTTCATCTTTTGAGCTACCAAAGGAATTGGAGGGGATTTTGGACGTGAATTCATTCGATTTCAAGTGGTTTAACTTTGAGGATCTCAAGTCGTGGACTTCTCATTTCTCTTCAGGAAATCTGATTGGTAAAGGTGGGAGTAACCGTGTGTACAAAGGGATTCTTCCTGGTGGAAAACCTATTGCAGTCAAAGTTTTAGAGTCATCAAAAGAAGCTTGTAAAGATTTTGCACAGGAAATGGAAATAATATCCTCTTTGAGGCACAAATACATAACCCCTTTGCTTGGAATTTGCATTGCAGTAGATGCTTTAATCTCTGTCTACGAGTTTTTCCCCAAAGGAAGCTTGGAGGAAAATTTACACGGTGAGAACAAGGATGGATCCATATTGTCATGGCAAGCTAGATTTAATATGGCAGTTGGTATAGGAGAAGCCCTCAGTTACCTTCACAATGAAACCTCAAAGCCTGTTATACACAGAGATGTCAAGTCTTCAAATATTCTTCTCTCCGATGGGTTTGAACCACAATTGACTGATTTTGGACTTGCAATTTGGGGACCAACGAGTTCATATTTTCTGACACAAGATGTAGTGGGAACATTCGGATATCTTGCTCCTGAATACTTCATGTATGGAAAATTAAGTGACAAGATAGATGTGTATGCCTTTGGTGTGGTTCTTCTTGAACTAATTTCAGGAAGGAAACCAATCAGTTCCGAGATTTGCAAAGGACAACAAAGTTTGGTCGCCTGGGCAAAACCTATAATAGATAGTGGGAACGTTAAAGACTTAGTGGACTCCAATTTAGAGGGAAAATTTGATGAAGTCCAAATGCAGAGAATGGTTAAGGCAGCAAATATGTGCATTACAAGGGGTGCTAGGCTTCGTCCTAAGATGAACCAGATACTGAAGATCCTGCAGGGAGAAGAAAGAGATGAGAGCTCACAAGGGTTTGATGATGAGCATACAGAAAACCAGGAGAATATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACATCTAACTCTTGCATTGCTTGATGTTGATGAGGATTCAGCATCATATAGCAGTAGTACAGAGAGGAGCAACAGTCTTTCTTTGGAAGAACACTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAA	2007	0.4131	MTVERGNVLVGIRIDSQSRQLLNWALVKVAQPGDCVVAVHVVKCSGHVSKNKPLLDKYLEVYEGLSDVKKVSLEGQIFRGRSVRNILVRESKNSSALALVVGGGAATAKHCAKRLPPTTDVVAIHDGRIVFSRCTNLTLPAGLIQDPRPSLTSMDDKEFLSEYGDSEVGTVKSICYGETREDVPEFNKEVFEGVKGSKKVCSRAISMFVGDPCEQKLGWPLLRRVNSEIISETPLARNMSVVQWVMNLPDRSPKKGFCFSSTEESLSERSISDIEDHTQKNNSFSSSFELPKELEGILDVNSFDFKWFNFEDLKSWTSHFSSGNLIGKGGSNRVYKGILPGGKPIAVKVLESSKEACKDFAQEMEIISSLRHKYITPLLGICIAVDALISVYEFFPKGSLEENLHGENKDGSILSWQARFNMAVGIGEALSYLHNETSKPVIHRDVKSSNILLSDGFEPQLTDFGLAIWGPTSSYFLTQDVVGTFGYLAPEYFMYGKLSDKIDVYAFGVVLLELISGRKPISSEICKGQQSLVAWAKPIIDSGNVKDLVDSNLEGKFDEVQMQRMVKAANMCITRGARLRPKMNQILKILQGEERDESSQGFDDEHTENQENIDDEVYPNSSAELHLTLALLDVDEDSASYSSSTERSNSLSLEEHLKERWSRSSSFD	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g1364	668	FunFam	Putative receptor-like serine/threonine-protein kinase	395	606	-	-
	Lele45g1364	668	MobiDBLite	consensus disorder prediction	651	668	-	-
	Lele45g1364	668	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	441	453	IPR008271	GO:0004672\|GO:0006468
	Lele45g1364	668	SUPERFAMILY	Protein kinase-like (PK-like)	303	590	IPR011009	-
	Lele45g1364	668	Pfam	Protein kinase domain	322	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g1364	668	ProSiteProfiles	Protein kinase domain profile.	320	602	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g1364	668	Gene3D	Transferase(Phosphotransferase) domain 1	395	608	-	-
	Lele45g1364	668	SMART	serkin_6	320	566	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele45g1364	668	MobiDBLite	consensus disorder prediction	638	668	-	-
	Lele45g1364	668	Gene3D	Phosphorylase Kinase; domain 1	260	394	-	-
	Lele45g1364	668	FunFam	probable receptor-like serine/threonine-protein kinase At5g57670	289	394	-	-
	Lele45g1364	668	PANTHER	OS08G0249100 PROTEIN	234	612	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g1364	Lele-ChrLele45	23256263	23259464	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g1364	308	593	Trihelix Transcription Factor Family	AT1G70460	42.955	2.70e-73	248

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Lele45g1364		Pkinase	1.6e-39	CL0016