Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1357 ATGGGAAGGTCTCCTTGTTGTGAGAAAGCCCACACCAACAAAGGCGCCTGGACCAAGGAGGAAGACGATCGCCTCATCTCTTATATCCGCGCTCACGGCGAGGGTTGCTGGCGCTCCCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGTCCTGACCTCAAACGGGGCAATTTCACTGAAGAAGAAGACGAGCTCATCATCAAACTCCACAGTCTTCTCGGCAACAAGTGGTCTCTCATAGCCGGAAGATTACCGGGAAGAACAGACAATGAGATAAAGAACTACTGGAACACCCACATCAGAAGGAAGCTCTTGAACAGAGGAATCGACCCTTCCACTCACCGGCCCCTGAATGAGCCCGCCAATTCTTCCCAGAACAATGAAGAAACAGCAGCCACCACCATCTCTTTCGCCTCGCATGTCAAACAAGAGAGCAGTGATGACAACAAGGTAAACGTGTTCGTGGAGATTCAGAGAGATGCAAAGAGGGGCGTAGCAGTGGAACGATGCCCTGACCTGAACCTGGAGCTCACCATTAGTCCTCCTCATCAAAACCAGGAGGCAGGGGATCAAGTTCACCAGCCAATACTCAAGAGTGGCGGAGGGAGAAGAAGCCTCTGTTTCGCTTGCAGTTTAGGGTTGCAGAATAGCAAAGATTGCAGCTGTGGAATTGTTGGCAACATTAATGGAAGCACCGGCGGGAGTAGTAGCACCACCGGTGGGTATGATTTCTTGGGGTTGAAAAGCTCTGTTTTGGATTACAGGAGCTTGGAGATGAAGTGA 819 0.5263 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNEPANSSQNNEETAATTISFASHVKQESSDDNKVNVFVEIQRDAKRGVAVERCPDLNLELTISPPHQNQEAGDQVHQPILKSGGGRRSLCFACSLGLQNSKDCSCGIVGNINGSTGGSSSTTGGYDFLGLKSSVLDYRSLEMK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1357 272 FunFam MYB-related transcription factor 13 66 - -
Lele45g1357 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele45g1357 272 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele45g1357 272 MobiDBLite consensus disorder prediction 128 142 - -
Lele45g1357 272 FunFam Myb transcription factor 68 137 - -
Lele45g1357 272 Gene3D - 14 66 - -
Lele45g1357 272 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 172 - -
Lele45g1357 272 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele45g1357 272 MobiDBLite consensus disorder prediction 120 142 - -
Lele45g1357 272 SMART sant 66 114 IPR001005 -
Lele45g1357 272 SMART sant 13 63 IPR001005 -
Lele45g1357 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele45g1357 272 Gene3D - 68 147 - -
Lele45g1357 272 CDD SANT 16 61 IPR001005 -
Lele45g1357 272 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele45g1357 272 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele45g1357 272 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele45g1357 272 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1357 Lele-ChrLele45 23202028 23202931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1357 1 272 MYB Transcription Factor Family AT4G38620 58.904 5.07e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele45g1357 Myb_DNA-binding 2.2e-14 CL0123