Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1323 ATGGCCATTAGAAAACACAGCAAGCTTCCTCAGACTGCAGTTCTGAAACAAATCCTTAAGAGATGTTCAAGCTTAGGGAAGAAAAATGGCTATGATGATGATGGCCTCCCTCTTGACGTCCCAAAAGGGCATTTTGCTGTGTATGTTGGTGAGAACAGAAGTAGGTATATTGTGCCTATCTCCTTCTTGACTCACCCAGAATTTCAGTCCCTTCTTCGTCAGGCTGAAGAAGAATTTGGCTTCGATCATGATATGGGTCTCACTATCCCTTGTGAGGAAGTTGTTTTCAGGTCCCTAACATCAATGCTTAGATGA 315 0.4317 MAIRKHSKLPQTAVLKQILKRCSSLGKKNGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1323 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
Lele45g1323 104 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1323 Lele-ChrLele45 22994599 22994913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1323 1 99 Calmodulin-binding Proteins AT3G43120 43.564 2.62e-22 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1323 45 22994599 22994913 Lele47g0087 47 599021 599335 hybridization
Lele45g1323 45 22994599 22994913 Lele48g0091 48 1326762 1330356 hybridization