Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1322 ATGTCGCCGGCGGCCGCCAAGTGCAGCAAAATCCGACACATTGTTCGAATCCGCCAGATGCTCCTCCGGTGGCGCAAGAAGGCGCGCACAACTGCTGTTCGAACACCGTCCGATGTGCCGGCCGGTCACGTGGCCGTCTGTGTGGGACCCAGCTGCCGGAGGTTTATCGTGCGAGCGACGTACCTGAACCATCCGGTCTTCAACAAGCTTCTGGCTCAAGCCGAAGAGGAGTACGGGTTTTGCAATCAAGGTCCCTTGACGATCCCTTGCGACGAGTCAATGTTTGAGGAGGTCCTCCGGGTCGTGTCCCGGTCTGAGTCGGGTCGCTCGTTCCGCTTCTTGAACCTCGAAGATCTCCAGAGGCGCTGCCACGTGGACTTGGCGGGAGAATCCTGGCCGTTGCTTCATGAGGAGGCTATCTAAATGGGATGTGGTAGATCGGCCACTGATGGGGGATTGGCGGGGCCACCGGCCACCCTCGGTGAAAGGGAAAAGGCAAAAGCTCAAAACACTATCTAA 519 0.5877 MSPAAAKCSKIRHIVRIRQMLLRWRKKARTTAVRTPSDVPAGHVAVCVGPSCRRFIVRATYLNHPVFNKLLAQAEEEYGFCNQGPLTIPCDESMFEEVLRVVSRSESGRSFRFLNLEDLQRRCHVDLAGESWPLLHEEAIXMGCGRSATDGGLAGPPATLGEREKAKAQNTI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1322 172 MobiDBLite consensus disorder prediction 146 172 - -
Lele45g1322 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
Lele45g1322 172 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1322 Lele-ChrLele45 22983792 22984731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1322 6 135 Calmodulin-binding Proteins AT4G34750 55.000 1.22e-43 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1322 45 22983792 22984731 Lele45g1322 45 22983792 22984731 ECH
Lele45g1322 45 22983792 22984731 Lele47g0088 47 610322 610747 hybridization
Lele45g1322 45 22983792 22984731 Lele48g0092 48 1340660 1341028 hybridization