LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele45g1321	ATGGCTGCTTCCAATCTCTCCACTTTTTCTTCCTCACTTCCAAAGACCTCTTCTTTCCCTCTTAACAACTCTCACGCCCACACTTCTTTCTCCACTCAAACCCTCGCAAACCCCTCATTCTTTCTCAACCCAGCTATTCCTCACAAATCCTCTTTCGTGCTTTCCTCCAAAAACCCACTTTCTGATATTGTCTCTGTAAATAAGCCATACCCAAAAGTTCAGTTTGATGATGCTGATGATGACGAAAAGCCTCGCGAGGAGTGTGGGGTCGTGGGTTATCGATTTGGGTCTGTTGGGGTTGCTCATAATGGAAATTTGGTGAATTATCGAACGTTGAGAGCGAAGCTTGAAGATAATGGGTCGATTTTTAACACTAGTTCTGATACTGAGGTTGTGCTTCATCTTATTGCTACTTCAAAGCACAGACCCTTTATATCTAGGATTGTTGATGCTTGTGAGAAGCTTGAAGGGGCTTATTCTATTGTTTTTGTGACAGAGGATAAGCTTGTTGCAGTGAGGGATCCATTTGGGTTTCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTGCTATTGTTTTTGCCTCTGAAACTTGTGCTCTTGATTTGATCGAAGCAACATATGAAAGGGAGGTTTTCCCAGGTGAAGTATTGGTGGTGGATAAAAACGGGCTTCAATCTCTTTGCTTAATGCCTCATCCACAACCAAAACAATGCATTTTTGAGCATATTTACTTTGCACTTCCCAACTCAGTTGTTTTTGGAAGATCAGTGTATGAATCCAGGAGAAAATTTGGTGAAATTCTGGCCACGGAAAGCCCAGTGGATTCTGATGTCGTGATTGCAGTTCCAGATTCTGGTGTGGTCGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTCCAACAAGGCCTCATAAGATCTCACTATGTGGGAAGAACTTTCATTGAGCCATCACAGAAGATCAGAGACTTTGGTGTGAAGCTGAAACTCTCACCTGTTAGAGCTGTTCTTGAAGGCAAAAGGGTTGTGGTTGTGGATGATTCTATTGTGAGAGGAACAACATCTTCTAAAATTGTGAGGTTGATTAAAGAAGCAGGGGCTAAGGAAGTTCATATGAGGATTGCAAGCCCACCAATGATTGCTTCATGCTATTATGGAGTGGATACACCAAGTTCAGAGGAATTGATATCTAACAGAATGAGTGTGGAGGAAATCAGAGAGTTTATTGGGTCAGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAAGAAGCTTTTGGGGGATGATTCTGGTAATTTCTGTTATGCTTGCTTTTCTGGGAAGTACCCAGTTGAGCCAAGAGGGCTTAAAGTGAAGAGGGTTGGTGATTTTGTGGATGATGGATTGAATGGGAGCTTGGAATCCATTGATGGAGGTTGGGTTCAAGCAAACCTGAACCAGAGAGAGATCAAAGTGGGTAGTTTCTGA	1470	0.4259	MAASNLSTFSSSLPKTSSFPLNNSHAHTSFSTQTLANPSFFLNPAIPHKSSFVLSSKNPLSDIVSVNKPYPKVQFDDADDDEKPREECGVVGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTSSDTEVVLHLIATSKHRPFISRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAIVFASETCALDLIEATYEREVFPGEVLVVDKNGLQSLCLMPHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDSDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIASPPMIASCYYGVDTPSSEELISNRMSVEEIREFIGSDSLAFLPFDSLKKLLGDDSGNFCYACFSGKYPVEPRGLKVKRVGDFVDDGLNGSLESIDGGWVQANLNQREIKVGSF	489

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele45g1321	489	CDD	PRTases_typeI	265	376	IPR000836	-
	Lele45g1321	489	Gene3D	-	262	426	IPR029057	-
	Lele45g1321	489	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	1	222	IPR017932	-
	Lele45g1321	489	TIGRFAM	purF: amidophosphoribosyltransferase	93	444	IPR005854	GO:0004044\|GO:0009113
	Lele45g1321	489	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	80	228	IPR029055	-
	Lele45g1321	489	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	79	255	IPR029055	-
	Lele45g1321	489	Pfam	Glutamine amidotransferase domain	96	200	IPR017932	-
	Lele45g1321	489	Pfam	Phosphoribosyl transferase domain	261	372	IPR000836	-
	Lele45g1321	489	Hamap	Amidophosphoribosyltransferase [purF].	2	443	IPR005854	GO:0004044\|GO:0009113
	Lele45g1321	489	SUPERFAMILY	PRTase-like	238	448	IPR029057	-
	Lele45g1321	489	PANTHER	AMIDOPHOSPHORIBOSYLTRANSFERASE	90	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele45g1321	Lele-ChrLele45	22972583	22974307	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele45g1321	90	476	PRT Gene Family	AT4G34740	85.271	0.0	682