Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1319 ATGGCTCCGTTCAGCGGCGATGAAACAGCACCGTTTTTTGGCTTCCTCGGAGCCGCGGCTGCTCTTGTTTTCTCCTGTATGGGAGCTGCCTATGGCACAGCAAAGAGTGGGGTAGGTGTGGCCTCGATGGGGGTCATGAGACCTGAGCTGGTTATGAAGTCCATTGTTCCTGTTGTTATGGCTGGAGTTTTGGGTATTTATGGCCTTATTATTGCTGTTATAATCAGTACCGGGATTAATCCGAAGGCAAAATCTTATTACCTGTTCGATGGTTATGCACATCTCTCCTCTGGTCTGGCCTGTGGGCTGGCTGGTCTCTCTGCTGGCATGGCAATTGGTATTGTTGGTGATGCTGGTGTTCGGTACAACCCTCTTACTTTAGTATATTTTGATTGAGCAAATGCCCAACAGCCTAAATTGTTCGTTGGAATGATTCTCATTCTCATCTTTGCTGAAGCTCTTGCTCTCTATGGTCTCATTGTTGGTATTATCTTGTCTTCTCGTGCTGGTCAGTCCAGAGCAGATTAA 528 0.4716 MAPFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYNPLTLVYFDXANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1319 175 SUPERFAMILY F1F0 ATP synthase subunit C 13 76 IPR035921 -
Lele45g1319 175 FunFam V-type proton ATPase proteolipid subunit 10 172 - -
Lele45g1319 175 SUPERFAMILY F1F0 ATP synthase subunit C 86 166 IPR035921 -
Lele45g1319 175 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Lele45g1319 175 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Lele45g1319 175 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele45g1319 175 Pfam ATP synthase subunit C 96 165 IPR002379 GO:0015078|GO:0033177|GO:1902600
Lele45g1319 175 CDD ATP-synt_Vo_c_ATP6C_rpt2 88 166 - -
Lele45g1319 175 Gene3D - 10 172 IPR035921 -
Lele45g1319 175 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele45g1319 175 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele45g1319 175 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Lele45g1319 175 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1319 Lele-ChrLele45 22962900 22964475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1319 1 175 Primary Pumps ATPases(2) AT2G16510 92.000 4.21e-107 301