Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1304 ATGAAGATCCAATGTGATGTGTGTGAGAAAATGGAAGCTTCAGTGTTCTGTGCTGCAGACGAAGCTGCTCTCTGCCATGGCTGTGATTCAAGCATCCACCATGCCAACAAGCTCGCTGGCAAACACATACGCTTCTCTCTTCGCCATCCCACCTCTAAAGATTCCCCTCTCTGTGATATCTGCCAAGAGAAGAGAGCGTATCTGTTTTGCAAAGAAGACAGAGCAATACTATGCAGAGAATGTGACCTTAACATTCACAGAGCCAATGAACACACACAGAAACACAATAGGTTTCTCCTTACAGGCGTGAAGCTTTCTGATGCTTCTTCTTCTGGGGACCCATCTTCATCTTCCTGCAATGCCATAACCACAGAGCATGATAATAAAAGAGTCGATAATGGAGGTCGTGAAGGAAGAAGATCGTGTAGGAACTCTAATAACACAAACAGAGCCACAACAACATGGGATTGCAGCAATGAGAATTTCAGTTCTTCTAATTCAGTTGTGAATTCTGATACTATGGTTAGTGACACAGAAGCAGTTTCCACGAGCAGTTTTTCTGAGTATTTGATTGAGACGATACCTGGGTTTTGCTTTGAAGACCTAATCGATGCTTCGTTTCATTCTCTATGTAAGAATGAGGATGAGCATGATTCAACATTTGACGATGAATATGAAGAAGATGTTCCTGATAGAATGTGTTCATATCCAAAAGCAAACGCAGCAAAAGAAATCTGGAAATGGAAGCAAAATGGCTTTCACTACTAA 768 0.4193 MKIQCDVCEKMEASVFCAADEAALCHGCDSSIHHANKLAGKHIRFSLRHPTSKDSPLCDICQEKRAYLFCKEDRAILCRECDLNIHRANEHTQKHNRFLLTGVKLSDASSSGDPSSSSCNAITTEHDNKRVDNGGREGRRSCRNSNNTNRATTTWDCSNENFSSSNSVVNSDTMVSDTEAVSTSSFSEYLIETIPGFCFEDLIDASFHSLCKNEDEHDSTFDDEYEEDVPDRMCSYPKANAAKEIWKWKQNGFHY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1304 255 MobiDBLite consensus disorder prediction 125 139 - -
Lele45g1304 255 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Lele45g1304 255 MobiDBLite consensus disorder prediction 107 149 - -
Lele45g1304 255 Gene3D Classic Zinc Finger 1 100 - -
Lele45g1304 255 CDD Bbox1_BBX-like 5 47 - -
Lele45g1304 255 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lele45g1304 255 SMART bboxneu5 4 47 IPR000315 GO:0008270
Lele45g1304 255 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 221 - -
Lele45g1304 255 MobiDBLite consensus disorder prediction 107 124 - -
Lele45g1304 255 CDD Bbox1_BBX-like 57 100 - -
Lele45g1304 255 FunFam B-box zinc finger protein 21 1 98 - -
Lele45g1304 255 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Lele45g1304 255 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1304 Lele-ChrLele45 22830636 22832485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1304 1 207 C2C2-CO-like Transcription Factor Family AT1G75540 50.711 2.95e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele45g1304 zf-B_box 2.1e-08 No_clan