Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1300 ATGTTGAGAGAGATAAGAGAAGTAAAAGGAAGAGGAGCGACTAAGTGCCAAGACTGCGGGAACCAAGCAAAGAAGGGTTGCGAATTCATGAGATGCAGAACTTGCTGTAACAACAAAGGCTTTCTCTGCCTAACTCATGTCAACAGCACTTGGGTTCCTTCCTCTAGGAGGCGCCACCTTCAAACCCTCTCTCACAATAATCCATCTCCAGGATTAGAGGAATTGAACAAGTTTCCAGCAACGATGAGTTCGACGGCAGTGTTTCGGTGCGTTCGGGTGCGTTCTGAGGATGATACGGTTGACGAATACGCATATGAAACGTCTGTGAATATAGGAGGACGTGTGTTTAGTGGCGTTCTTTATGATCAAGGCCCTGAAACTGAGAGATTCTACATTAACAACGTTGTTGGTCAAAGTTCCAAAGGCCCTCTCAATCTGATTCATCATCAGGGAGATCATTTCATCGACACTCCAATGATTCAATCCCATGATGCTGCTGCCACTGTGCCTCCCTTAATAATGTCATCACCCTCATCTGTTGAGCATTTTTCTTCTTCGTCGTCGTATCCTCTTTCACTTGGAACCTTTAGGCCTGCTCTATCATATTTTGCTCAACCAAAGACTTCTTAG 630 0.4508 MLREIREVKGRGATKCQDCGNQAKKGCEFMRCRTCCNNKGFLCLTHVNSTWVPSSRRRHLQTLSHNNPSPGLEELNKFPATMSSTAVFRCVRVRSEDDTVDEYAYETSVNIGGRVFSGVLYDQGPETERFYINNVVGQSSKGPLNLIHHQGDHFIDTPMIQSHDAAATVPPLIMSSPSSVEHFSSSSSYPLSLGTFRPALSYFAQPKTS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1300 209 Pfam Domain of unknown function (DUF702) 13 62 - -
Lele45g1300 209 Pfam Domain of unknown function (DUF702) 75 126 - -
Lele45g1300 209 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 15 57 IPR006510 -
Lele45g1300 209 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 77 125 IPR006511 -
Lele45g1300 209 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 8 190 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1300 Lele-ChrLele45 22812335 22813057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1300 15 124 C2H2 Transcription Factor Family AT2G21400 51.145 2.81e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele45g1300 DUF702 6.9e-19 No_clan