Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1289 ATGGCTTCCTCAAGCGGAACGTCTTCAGGTTCAGGTTCGGCGTCTCTGGTTCATAACTCTGGTTCAGAGGAGGATTTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAGTCGGCACGGCGATCTCGGATGAGAAAACAGAAGCATCTTGACGATCTGGTGGCTCAAGTGGCTCAGCTGAGAAAAGAGAATCAGCAGATTCTCACAAGTGTGAATCTCACAACAGAACAGTACCTAACAGTTGAATCTGAAAACTCTGTTCTTCGAGCTCAAGCGAGTGAGCTGAGTCACAGGCTGGAATCTCTGAACGAGATAATCGATTTCTTGAATGCCAACAACAATGGAGGTTTTGGGAACAGCTTCAACATGGAGCCCAACAACAATGGAGGATTCTTCAATCCAATGAACATGGGATATCTGAACCATCCGATTATGGCTTCTGCAGATTTATGGCCGTGA 477 0.4633 MASSSGTSSGSGSASLVHNSGSEEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQILTSVNLTTEQYLTVESENSVLRAQASELSHRLESLNEIIDFLNANNNGGFGNSFNMEPNNNGGFFNPMNMGYLNHPIMASADLWP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1289 158 Coils Coil 49 76 - -
Lele45g1289 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 94 IPR004827 GO:0003700|GO:0006355
Lele45g1289 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Lele45g1289 158 FunFam Basic region/leucine zipper protein 31 113 - -
Lele45g1289 158 Pfam bZIP transcription factor 33 91 IPR004827 GO:0003700|GO:0006355
Lele45g1289 158 Coils Coil 91 118 - -
Lele45g1289 158 MobiDBLite consensus disorder prediction 1 53 - -
Lele45g1289 158 Gene3D - 31 85 - -
Lele45g1289 158 PANTHER BZIP TRANSCRIPTION FACTOR 44 3 154 - -
Lele45g1289 158 SUPERFAMILY Leucine zipper domain 33 85 IPR046347 GO:0003700|GO:0006355
Lele45g1289 158 MobiDBLite consensus disorder prediction 27 53 - -
Lele45g1289 158 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Lele45g1289 158 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Lele45g1289 158 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1289 Lele-ChrLele45 22732521 22732997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1289 29 155 bZIP Transcription Factor Family AT4G34590 60.150 3.17e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele45g1289 bZIP_1 5.1e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1289 45 22732521 22732997 Lele47g0118 47 871867 872429 hybridization
Lele45g1289 45 22732521 22732997 Lele48g0124 48 1595695 1596177 hybridization