Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1280 ATGAAGGGAGGGGGAAGGCTCAAAGGAGCTCTCAGGGCTCCCAAGAAGGACAAGGGTCCTGCTCCGTCCTCCAAACCCGCTAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTAAATAACATGGTACTATTCGATCAGGCTACCTATGACAAGCTCCTGTCTGAGGCACCAAAATATAAGCTCATCACGCCTTCCATCCTCTCTGATCGTTTGAGGATCAATGGATCACTAGCAAGGAAGGCCATTAGAGAATTGATGGCTAGAGGCTCAATCAGGATGGTACAAGTCGAAGTTGATGATAGAAGTAATGTGAATTGA 348 0.4828 MKGGGRLKGALRAPKKDKGPAPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVQVEVDDRSNVN 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1280 115 Gene3D - 32 110 - -
Lele45g1280 115 FunFam 40S ribosomal protein S25 32 112 - -
Lele45g1280 115 Pfam S25 ribosomal protein 22 105 IPR004977 -
Lele45g1280 115 MobiDBLite consensus disorder prediction 1 47 - -
Lele45g1280 115 PANTHER 40S RIBOSOMAL PROTEIN S25 13 107 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1280 Lele-ChrLele45 22672831 22676209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1280 13 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 90.526 8.52e-44 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1280 45 22672831 22676209 Lele47g0130 47 935134 940728 hybridization
Lele45g1280 45 22672831 22676209 Lele48g0132 48 1651606 1655143 hybridization