Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1267 ATGTTGCGTTGTCTGAACAATTCGGAGAATCTGGCCGAGTCCTCCTCTGATATGACATTGTTAGAAAGGCAAAGAGACAGGATGAAATGGCAACAGCCACAGCTTCATCATCATCATCAGAACCAGAGCAGCTACTTTTCTGGGAGTGGGTTTGACGGTGGGTTCTCGTCTCTGCAAGTTCCGAATTCTGGGGCGTTGCTGATGATGAAAGGCGGTGTTGACGGCGCTTGTCCTGGGCTTGGTGAGGTGGCTGCTAATGGCGCCTCGGTGAAGCCAGACCCGGGTTCGGAAAACGGGTGGCCCGAATTGGGTAAGGTCGACTTGCCTGGTATGGGATTCGTGTCCTCTGGATTTAATGCGAGCTCTGCAATTTCGAGGACTTCTAGCTGCCCGCTTTCAGTGGCGGCGTCGGCGGCAGCAACCACGACGACGACGATGATGACGGCGAAGATGAGATCGACAAGTGGGAGAGAGAGCTTCAAGAAGAGGAAATCTGATAAAGCTCAGATCCCCAAGGTTGTTGCAGAAAATGAGAAGAACAAGAAAAACAAAACAAGTGGTGAAGAAGGGGATAAATCCAAAGTCACAACAGATAATAATAATAACAACAATGACAAGGACAGAGAAACATCTGCAGAATCTTCGAAAGAGAATTCAAAAGCGTCTGATGTTCAAAATCAAAAGCCTGACTACATTCATGTTCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGAATGAAGTACTTGCAAGGTTTAGTTCCTGGTTGTAACAAAATCACAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGTTTTTGTCGATGAAACTAGCTGCTGTAAACCCAAGGATTGAATTCAACGTTGACGATCTGTTTACCAAGGAGGTTTTTCCTGCTTGTGCTCCTACAAGTTTTCCAGCCATAGATATGACACCAAATCCTGCATATCTTCAGTTTGACCCAACACAACAACATGTAGCTTCATGTTCCGGATTAGATATGGGCATAATAAACCCTCCAGATTTGGGGCTTCGAACGACCACTAGGGCCCCTGTTTCCTTGCCACACGAAACGTTTCTTGACTCATCCTGTTTCAATCAAATTCTGCCATTTTCAACCTGTGAAGGTGATTTGCAGAGCCTGTACAATGCTGCTTTTGATCAAGGCAGATCAACAACGTCGTCCTTTCCTTCTCAGCCATTCACAGGCCTAATTGAAGCTAGCAATCTAAAGATGGAGATGTGA 1317 0.4586 MLRCLNNSENLAESSSDMTLLERQRDRMKWQQPQLHHHHQNQSSYFSGSGFDGGFSSLQVPNSGALLMMKGGVDGACPGLGEVAANGASVKPDPGSENGWPELGKVDLPGMGFVSSGFNASSAISRTSSCPLSVAASAAATTTTTMMTAKMRSTSGRESFKKRKSDKAQIPKVVAENEKNKKNKTSGEEGDKSKVTTDNNNNNNDKDRETSAESSKENSKASDVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRIEFNVDDLFTKEVFPACAPTSFPAIDMTPNPAYLQFDPTQQHVASCSGLDMGIINPPDLGLRTTTRAPVSLPHETFLDSSCFNQILPFSTCEGDLQSLYNAAFDQGRSTTSSFPSQPFTGLIEASNLKMEM 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1267 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 240 290 IPR011598 GO:0046983
Lele45g1267 438 Pfam Helix-loop-helix DNA-binding domain 244 291 IPR011598 GO:0046983
Lele45g1267 438 Gene3D - 237 311 IPR036638 GO:0046983
Lele45g1267 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 238 309 IPR036638 GO:0046983
Lele45g1267 438 FunFam Basic helix-loop-helix transcription factor 237 309 - -
Lele45g1267 438 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 142 338 IPR024097 GO:0006355
Lele45g1267 438 SMART finulus 246 296 IPR011598 GO:0046983
Lele45g1267 438 CDD bHLH_AtBPE_like 230 315 - -
Lele45g1267 438 MobiDBLite consensus disorder prediction 155 216 - -
Lele45g1267 438 MobiDBLite consensus disorder prediction 146 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1267 Lele-ChrLele45 22604717 22607116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1267 107 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 46.014 9.10e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g1267 HLH 1e-05 No_clan