Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1262 ATGGCTGCTGCAGATGTTGAGTTCCGTTGTTTTGTCGGTGGGCTTGCATGGGCTACCGACAACGATGCTCTCAGCAGGGCCTTTTCTCCTTTCGGCGATGTTATCGACTCGAAGGTTATCAACGATCGCGAGACCGGAAGGTCTAGAGGGTTCGGATTCGTGACCTTCTCCTCAGAGCAGTCCATGAGGGATGCGATCGACGGCCTGAACGGTCAGAGCCTCGATGGCCGGAACATTACGGTGAACGAAGCTCAGTCTCGTGGTGGAAGAGGCGGTTACGGCGGCGGGAGTGGATATAGCCGTGGTGGAGGCGGATACGGAGGCGGTGGACGCCGTGAGGGTGGATACTACAGGAATGGTGGAGGATATGGCAATAGCGGCGGTTATGGAGACCGGGGATCTCGCTACTCTCGGGGAGGTGAGTCGTATGGAAGCTGGAGGAATTAA 447 0.5705 MAAADVEFRCFVGGLAWATDNDALSRAFSPFGDVIDSKVINDRETGRSRGFGFVTFSSEQSMRDAIDGLNGQSLDGRNITVNEAQSRGGRGGYGGGSGYSRGGGGYGGGGRREGGYYRNGGGYGNSGGYGDRGSRYSRGGESYGSWRN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1262 148 MobiDBLite consensus disorder prediction 74 148 - -
Lele45g1262 148 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Lele45g1262 148 FunFam Glycine-rich RNA-binding protein GRP1A 2 114 - -
Lele45g1262 148 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Lele45g1262 148 SUPERFAMILY RNA-binding domain, RBD 8 115 IPR035979 GO:0003676
Lele45g1262 148 Gene3D - 2 106 IPR012677 -
Lele45g1262 148 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 5 137 - -
Lele45g1262 148 SMART rrm1_1 9 82 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1262 Lele-ChrLele45 22572229 22572939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1262 2 90 Eukaryotic Initiation Factors Gene Family AT2G23350 33.333 6.90e-08 48.5