Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1259 ATGTCAACCATCTCCGACCATTCCTCCGGCAACTTTCTTCTGCATGAACTCACTAAGACCACCCCTTTTCTGGGTTTAGAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTCGTCTTTCTTGTGCTCCTGATCTTCCACTGCATTCACCGGAATCGAAGAAGATCCACGAGGCCCCGTACGCTAGCCAGCCAAAGCTCCGGCGTGATTCCGTTGGTCTCCAAGGAGATCGTGGAGGTTGAAGCCTTGGATCTTCTTGATAGCGAAGAGAAAAATCTTAAGGTTGAAGTTCGTGATCTGAGGAGGAAGAAGCAGCCGGAAGACGACGAGGAGATCAATGTTGGATTTTGCAGAGGAAAACAGAGGAACGATGAGAATGATACCGTCGACGGTCTGAAGATAGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGCTTGCGACACGTGGATTCTCCGACGATAATGTGATCGGAGAAGGAGGTTATGGAATTGTATACAGAGGAATTCTTCAAGATGGTTCAGTAGTTGCAGTGAAGAAACTTCTGAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAAGTTGAAGCTATTGGAAAAGTAAAGCATAAAAATTTGGTGGGTTTAATAGGATATTGTGCAGAAGGTTCTCAAAGGCTATCCTATTTGCATGAAGGGTTAGAACCCAAAGTCGTGCACCGAGATGTGAAATCTAGTAACATCCTTCTCGACAAAAGATGGAACGCCAAGGTATCGGACTTTGGACTGGCCAAACTCTTAGGATCCGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTCGGATATGTTTCGCCTGAGTATGCGAGCACGGGTATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTACTGATGGAGATAATCACCGGAAGAAGTCCCATTGATTATTCTAGATCGCCAGCGGAGATGAACTTGGTTGACTGGTTCAAGGGAATGGTGGCGAGTCGTCATGGAGATGAGCTAGTAGATCCTTCGATCGAGATTAAGCCCTCTCCGAGATCATTGAAGCGAGTTTTGCTAGTTTGTTTGCGCTGCATAGATATAGATGTCTCTAGAGAGAAAGATCCTGTGGCTTCTCATGCATCTGTTTCCAGCAAAATTTCATATCTACCAAAGCATGTGGACTCAGTTGAGAGATCAAGATGGAGATGA 1212 0.4554 MSTISDHSSGNFLLHELTKTTPFLGLELYIVICVFLFIFVFLVLLIFHCIHRNRRRSTRPRTLASQSSGVIPLVSKEIVEVEALDLLDSEEKNLKVEVRDLRRKKQPEDDEEINVGFCRGKQRNDENDTVDGLKIGWGRWYSLEELKLATRGFSDDNVIGEGGYGIVYRGILQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLIGYCAEGSQRLSYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRHGDELVDPSIEIKPSPRSLKRVLLVCLRCIDIDVSREKDPVASHASVSSKISYLPKHVDSVERSRWR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1259 403 FunFam serine/threonine-protein kinase PBS1-like 119 226 - -
Lele45g1259 403 Gene3D Phosphorylase Kinase; domain 1 119 222 - -
Lele45g1259 403 ProSiteProfiles Protein kinase domain profile. 57 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1259 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Lele45g1259 403 Pfam Protein kinase domain 154 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1259 403 Pfam Protein kinase domain 223 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1259 403 SMART serkin_6 153 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1259 403 FunFam Putative receptor-like serine/threonine-protein kinase 185 385 - -
Lele45g1259 403 Gene3D Transferase(Phosphotransferase) domain 1 223 395 - -
Lele45g1259 403 Coils Coil 84 104 - -
Lele45g1259 403 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Lele45g1259 403 PANTHER OS01G0323000 PROTEIN 221 372 - -
Lele45g1259 403 SUPERFAMILY Protein kinase-like (PK-like) 134 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1259 Lele-ChrLele45 22545425 22548197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1259 141 346 Trihelix Transcription Factor Family AT1G68690 42.742 9.26e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele45g1259 Pkinase 9e-23 CL0016