Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1239 ATGGTGGTTTCTAAGTTAACATACGAAGAATGCAGGAGACAACGGCTAGAAGAAAACAAGAGGAGAATGGAGGAACTAAACCTCAACAAGCTTGCTACTGCTTTGAAACCTTTACCTTCACCTAAGTCTTCCCCTGCGAAACCTAGGGTGCCACGTCAGGCAGTGGGTCCTTCTTCGGCTCCTGTAAGAAGGTCTAGTCGCGTAGCCAGCTTACCACCTCCCAACTACAAGGAAGTCCGCATCGAGCCTTTGCTGAGACCAAGAAGGTCGTGTCAGAAAAGGGACTTGCTGAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGAAAGAGCTGAAGAACTTCTCTCTGGTTTGGATTCTAAGTACCCAAGTTTCGTCAAGCCTATGCTCCAATCACATGTCACTGGAGGATTTTGGCTTGGTCTTCCAGTTCATTTCTGCAAAACTCATCTTCCTCAACATGATGAAACAATAACTCTGATAGATGAGGATGGGAACGAGTCTTCTACCAAATACCTTGCTGATAAAACTGGTCTTAGTGGTGGTTGGCGAGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTGGTGTTTCAACTGATCAAACCCACAAAATTTAAGGTGTTCATAATTAGAGCATATCAATCAGAAAACAAAGAGGAAGGAGATGAAGATTTGGATGCTTCACTCTTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTACAAGAAGCTGTCTTCTCTCTCTCTCTTCCCCGCCGGCACCACATTCCATTGATCGATTCGAAGTCGCTACAGATCAACCATTGTCTTCAATGGCGGGAAACGCCATTGATGGAGTCACAGATTACAGTAAAACGGAACGCTTGGTTCTCCTCATAGACCTCAATCCACTTCTTCATAATGAGGATCCCGCTCCTTACATCAATTCCCTTCTCATATCCACGAAAATCCTTCTCACCTTCCCTCCTCTCTCGTCTTCTCTCTTCTGCTTTAAGCTCTTCTTTTCCTCACTTTCTCCCCTTCTTTCATCCTCTAAACTCCACAGTTTTGTCCCCAACACCTCACTTTCTCTCTCATTCAGTGACTCCACCTCTACCCTCCAATCCCTCTCACAGGCACTCAATTCTCTGCCTCATTTTTACAATCCATTGGATCCCTCTCCTCCCAGGGCCTCACATCTTGCCGCATCGGTTCAACAGATTGTACACGACTATGCTTGGGACTCGGTACTGTGTGATCCAGTACCAGATTTTGTTCTGAATTACCCAGCTGTCCGGTCGAATTTGGTTCTAGGTCACGAGTCGTTGAAAAATGGGGGTTCGTTTTGTGAGAGATTCTCTGGGTTCTTCAGAAGTGTGAGTGGTGCATTTGGTTGTAGGGACATTCATTTTAGTTGGGTTGATGTGAAGTGTGAATCTGAATGTTATGAGAAAAAGAATGAGACCGATGAAATTAAACAGATTTGTAGTTTCTTTGAGAGTGGAATTAGAGCTTTCGTTTGGGGGTTATGTTCTGTGGATTCGGAAACTTCATGCGCAATTCAGTCTTTAGATCTTAGATGAGGCTGTGAACAAAAGGAAAAGTTTTGGAAGCAATTTGGTAATGGAATCACAAAATTTAGTATTAAGGCTCTGCAGAGGAATGATGCTTTTGTGAAACTAAGGGATCGCATATCTGATTCTATTCTTGTACGAGAAGTATTTGGTGAATCCAAGAAAAAGAGAAAGGAAATTTCAAATGAATTCTTGGCAGATAGGGTTCTTGAAATTCTTGCAATTGAATTTGGTTTCCTGAGGCAGAGAAACTCTGTACCCATTTGGCAAATGCTCTTGAGTTTTCTTTATAACGAAGGTTGCTGGGCATTGGTGTCCCTTTCTAATAGCGAAGGTGGTTCATTTATGGGAATTCTAAGGCCTTTTACAATTTCTTCTGCTCTCTTATCTCTATTAGACGATCCAGATATGGTTCTTGATTTTGGTGGAGAAAATATGGCTCAATATTTCAGGACATCGAGTGCTGATGTTTGCAAGCCTGATATCAACTTCAAAACGCATGATAAACTATTGGATTCTCAAGATAAGAAGAGTGGTGCAGTGATGGAGGGTCATCAGAAAAAGAAGATAATGGACAGGAATAACCTTCAAAATCTCACATGGAGCACCTTCTGGAAAGCCGCATATGATCAATTTCACATAGACTTGCATGAGGTTCAATATGCTATTGAATGCAACAAGTCAAATAAGTTGAAATTTTTGAAGTGCTGGATGAAACAGATGAAGAAATCTGACTGTCCGATTAGATTGATTGGATCACTCCAAGATGGTGAACTGCCAATCTCCTCATCTGCTTCAGCAGGAGAGAACACCGTAGCTGAGGCTTCAGGAGTACAGGCTGGTGCTGTGCTTGATACTGTGTTAGAAACATCTGAAGCATTTTTCATTTATGTTGCGTTGTTACAATCAGATGTTGGAAGTGGAGTTGAAGAGTCAAGCAAACAGAAGATGATGAAGCAAATTTGCCTTCTTCTGGAGAACATTCAGTGCCATATGGAATGGGGATTCTTTGGTGATTGGAACCTTGATAATTATGTGGCAAAGATCATAAAAAGCAGGTATTCTCATTCCCTTGGAGACGTGGTTCATGGAATCTACGACAAGATGGACCTATTGCTGTTTGCTGAAGAGGATGAAACCCCTAATCATTTTCTCATCAGTGAAGACAGCAACAAATCCTGGGATGGAAAGGCAGACAGAGATGAGATGGGTGAAAATAATAAACTTTGGGCCCCAAAGCAGATGCCTCTGAAACCAAAGTCAGATTCTTTTAGAAAGCTGCCAACGAGGAAGAAGAAGCGGGAGAGGGCAAGCTATGACAGAGTATGTGAGACCCCATTGACAGGAAACAAGCGTTCATGTACCTGGACAAGAAAGGTGGATGATGACCATTACAGGGTTGATGGGAGTCAATCAAGTTCAGTTTCCAAGGCTTTATTTCATGATGATCAATTGATGTGA 3030 0.4241 MVVSKLTYEECRRQRLEENKRRMEELNLNKLATALKPLPSPKSSPAKPRVPRQAVGPSSAPVRRSSRVASLPPPNYKEVRIEPLLRPRRSCQKRDLLNRVYASDEVRQYAIERAEELLSGLDSKYPSFVKPMLQSHVTGGFWLGLPVHFCKTHLPQHDETITLIDEDGNESSTKYLADKTGLSGGWRGFSIDHELVDGDALVFQLIKPTKFKVFIIRAYQSENKEEGDEDLDASLLNRSSKRVRASTRSCLLSLSSPPAPHSIDRFEVATDQPLSSMAGNAIDGVTDYSKTERLVLLIDLNPLLHNEDPAPYINSLLISTKILLTFPPLSSSLFCFKLFFSSLSPLLSSSKLHSFVPNTSLSLSFSDSTSTLQSLSQALNSLPHFYNPLDPSPPRASHLAASVQQIVHDYAWDSVLCDPVPDFVLNYPAVRSNLVLGHESLKNGGSFCERFSGFFRSVSGAFGCRDIHFSWVDVKCESECYEKKNETDEIKQICSFFESGIRAFVWGLCSVDSETSCAIQSLDLRXGCEQKEKFWKQFGNGITKFSIKALQRNDAFVKLRDRISDSILVREVFGESKKKRKEISNEFLADRVLEILAIEFGFLRQRNSVPIWQMLLSFLYNEGCWALVSLSNSEGGSFMGILRPFTISSALLSLLDDPDMVLDFGGENMAQYFRTSSADVCKPDINFKTHDKLLDSQDKKSGAVMEGHQKKKIMDRNNLQNLTWSTFWKAAYDQFHIDLHEVQYAIECNKSNKLKFLKCWMKQMKKSDCPIRLIGSLQDGELPISSSASAGENTVAEASGVQAGAVLDTVLETSEAFFIYVALLQSDVGSGVEESSKQKMMKQICLLLENIQCHMEWGFFGDWNLDNYVAKIIKSRYSHSLGDVVHGIYDKMDLLLFAEEDETPNHFLISEDSNKSWDGKADRDEMGENNKLWAPKQMPLKPKSDSFRKLPTRKKKRERASYDRVCETPLTGNKRSCTWTRKVDDDHYRVDGSQSSSVSKALFHDDQLM 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1239 1009 Pfam B3 DNA binding domain 128 215 IPR003340 GO:0003677
Lele45g1239 1009 PANTHER UNCHARACTERIZED 439 513 IPR026153 GO:0005634|GO:0006260|GO:0010212|GO:0033314
Lele45g1239 1009 SUPERFAMILY DNA-binding pseudobarrel domain 121 217 IPR015300 -
Lele45g1239 1009 CDD B3_DNA 126 217 IPR003340 GO:0003677
Lele45g1239 1009 MobiDBLite consensus disorder prediction 27 74 - -
Lele45g1239 1009 Coils Coil 6 33 - -
Lele45g1239 1009 Gene3D - 104 220 IPR015300 -
Lele45g1239 1009 SMART B3_2 128 220 IPR003340 GO:0003677
Lele45g1239 1009 ProSiteProfiles B3 DNA-binding domain profile. 128 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1239 Lele-ChrLele45 22385279 22399053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1239 1 240 B3 DNA Binding Superfamily AT3G19184 59.600 6.63e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele45g1239 B3 1.3e-13 CL0405