Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1235 ATGTACATCAGGCAACGTAAGCTTCTTTACAACAGAGACGAGTTCGACGATGAAGGAGAACAAGTCATCGTCGATTATTTCGTTGGTACTGTTCCTCACAAGTTTGATAGCCTGAAACTTCTGTTTGAACTGGATCTCAATAACAATAGGTTTGCCGGGAAGTTCCCCACAGTGGTTCTGAGGCTTCCCGCTCGCAAATTATTGGATATGAGATTCAATGAATTTGAAGGGACTGTGCCTAGAGAGCTTTTTGATAAGGATCTGGAGACGATCTTTATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAAATTTGGGAACTCTCTGGAGTTGGTCATCGTCATCGCCACCAATAAGTTCCCTGGCTGAAGGCATCTTGGGCAGACAAGGTGGGACCATGAAGACATGACCTCATGA 420 0.4405 MYIRQRKLLYNRDEFDDEGEQVIVDYFVGTVPHKFDSLKLLFELDLNNNRFAGKFPTVVLRLPARKLLDMRFNEFEGTVPRELFDKDLETIFINNNRFVFDLPDKFGNSLELVIVIATNKFPGXRHLGQTRWDHEDMTS 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1235 139 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 123 - -
Lele45g1235 139 SUPERFAMILY L domain-like 27 114 - -
Lele45g1235 139 Gene3D Ribonuclease Inhibitor 21 131 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1235 Lele-ChrLele45 22345949 22347201 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1235 27 123 Leucine-rich Repeat extension Gene Families AT4G13340 72.165 3.67e-44 151