Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1224 ATGGACGTGGCGCAGGGATGTGATGGGTCAGTACTGCTGGATGACACAGAGGAAATGAAAGGAGAAAAGAAAGCAGGACCCAATCTGAATTCTGTGAGAGGCTTCCAAGTCATTGACGCCATTAAAGCCGACCTCGAAAGCTCCTGTCCCTCCACTGTGTCCTGCGCTGACATCCTTGCCCGCGCCGCCCGAGAAGCTGTCTTGCAGGCTGGAGGACCATCTTGGGCTGTGGGATTAGGGCGAAGAGATTCAGTGACTGCAAGCATGGACGCAGCCAATCAGCAGATCCCCTCTCCTTTAGAGTCACTTCGAAACATCACAGCCAAGTTCACTTCCAAGGGTCTTAACCTCAGGGACGTCGTTGTCCTCTCTGGAGGGCACACGATTGGATTTGCACAGTGTTTTACGTTTAAAGGGAGGCTGTTCGACTTCAAAGGGTCGGGTAAACCCGATCCAGATTTGGATTCGGTGCTGCTGTCGGGTTTACAGAGAAGGTGTCCTAACAGGAACTCCTCCGCTGCAAACCTGGCTCCTCTCGATCCTGCTTCGTTTTCCAGATTCGACAACGCTTATTACAGCAACCTGGTTAAGAACACGGGGCTCCTCCAATCTGATCAAGTTCTTAGTTTTGATGCCACCACTGCTGATTTGGTGAATTACTATAGTCAGAACCAGTTCGCCTTCTTCAATGACTTCTTTGCCTCCATGGTTAAACTCAGCCGTGTTGGTGTTCTTACAGGCCAGAACGGCCAAGTTAGACTCAAGTGTGGCTCTGTTAATCAAGATTAA 789 0.5044 MDVAQGCDGSVLLDDTEEMKGEKKAGPNLNSVRGFQVIDAIKADLESSCPSTVSCADILARAAREAVLQAGGPSWAVGLGRRDSVTASMDAANQQIPSPLESLRNITAKFTSKGLNLRDVVVLSGGHTIGFAQCFTFKGRLFDFKGSGKPDPDLDSVLLSGLQRRCPNRNSSAANLAPLDPASFSRFDNAYYSNLVKNTGLLQSDQVLSFDATTADLVNYYSQNQFAFFNDFFASMVKLSRVGVLTGQNGQVRLKCGSVNQD 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1224 262 Gene3D Peroxidase, domain 2 97 239 - -
Lele45g1224 262 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Haem peroxidase superfamily signature 53 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 SUPERFAMILY Heme-dependent peroxidases 5 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 FunFam Peroxidase 97 239 - -
Lele45g1224 262 Pfam Peroxidase 4 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 ProSiteProfiles Plant heme peroxidase family profile. 5 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 CDD secretory_peroxidase 5 259 IPR033905 GO:0004601|GO:0042744
Lele45g1224 262 PANTHER PEROXIDASE 72-RELATED 5 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 Gene3D - 5 260 - -
Lele45g1224 262 ProSitePatterns Peroxidases proximal heme-ligand signature. 119 129 IPR019793 -
Lele45g1224 262 PRINTS Plant peroxidase signature 33 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 71 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 178 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 194 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 52 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 234 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1224 262 PRINTS Plant peroxidase signature 118 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1224 Lele-ChrLele45 22281530 22282413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1224 5 257 Peroxidase AT1G49570 63.529 8.96e-112 324