Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1222 ATGGGTTCGGTTCCTCCGGAACTGAGCTTGGATTTGAGACCCACTTTTGTTCCCAAGACAGTCAGTGATTTTCTCTACGAGGAGGAATCAGCAAAACTCAGGGCACCTATTTCTCAGCCAGTGCTGGAAGACTTTATTCCCTTGACGGAAGAATGTGATCAGAAAAAGGATGATAAGAAAGAAAAAGAATGTAGAGATAAGAAGAATTGGATGAGCTCTGTTCAGCTCTGGAATACCGATAATCATCTCACTAACGATGCTTATGAACAAAGAAGACAACACTATGAATTAGAAAACAAGAAATGCGAAGAGGAAGGACAATCTGTGCCTGAGGATCCATTCCAATCTCGTAGAGACGGTGATAATAGATGCAGGGCGTTCTTGGCTCTTTCAACCTACTCTAGCGTCCCTGCTACACCAGTGACAACTAAGGAAGAAAAGGAAGACTCCATTAATGGGCTCTCTCTTATGACTCCTGGTACTAAAAGTTTGAGGTCTGGTTCAAGTGGATCGAGAAGTAGCTCTAGCAGAGCAGTTTCTTCTTCAACTCCATGTTCCCAGCCAATTATACCCACAGCTCATCAGCAGCAGCCACAGAAGCAAGTTGCCCGGAAACAGAGGAGGTGCTGGTCGCCAGAGCTGCACCGACGATTTGTCAATGCATTACAGCAACTCGGAGGTTCTCTAGCGGCAACCCCAAAACAAATAAGAGAACTCATGCAGGTTGATGGCTTGACCAACGATGAAGTCAAGAGTCATTTACAAAAATATCGACTTCACACTCGAAGAACGCCTGCTGATCAATCTGTATTTCTTGGAAGCTTGGGGATGTCTCCAGATCAACGCAATGAATCCTCCAAAGCTAGCAGTTCTGGGTCTGGTTCTCCTCAAGGTCCTTTCCAGTTAGCAGCATCCGGTGGAGGGATGTCTCGAACAGAAGGTGACAGCATGGAAGACGGTGAAGATGATGAGAGCTTTAGCTGGAAAAGTCACATTCACAAAACTGGAAAAGATGTATAG 1020 0.4539 MGSVPPELSLDLRPTFVPKTVSDFLYEEESAKLRAPISQPVLEDFIPLTEECDQKKDDKKEKECRDKKNWMSSVQLWNTDNHLTNDAYEQRRQHYELENKKCEEEGQSVPEDPFQSRRDGDNRCRAFLALSTYSSVPATPVTTKEEKEDSINGLSLMTPGTKSLRSGSSGSRSSSSRAVSSSTPCSQPIIPTAHQQQPQKQVARKQRRCWSPELHRRFVNALQQLGGSLAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRTPADQSVFLGSLGMSPDQRNESSKASSSGSGSPQGPFQLAASGGGMSRTEGDSMEDGEDDESFSWKSHIHKTGKDV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1222 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 260 IPR006447 GO:0003677
Lele45g1222 339 MobiDBLite consensus disorder prediction 274 300 - -
Lele45g1222 339 FunFam Myb family transcription factor 204 262 - -
Lele45g1222 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 262 IPR017930 -
Lele45g1222 339 Pfam Myb-like DNA-binding domain 207 258 IPR001005 -
Lele45g1222 339 MobiDBLite consensus disorder prediction 138 208 - -
Lele45g1222 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 32 328 IPR044787 GO:0003700|GO:0006355
Lele45g1222 339 MobiDBLite consensus disorder prediction 268 339 - -
Lele45g1222 339 MobiDBLite consensus disorder prediction 323 339 - -
Lele45g1222 339 MobiDBLite consensus disorder prediction 154 204 - -
Lele45g1222 339 MobiDBLite consensus disorder prediction 99 120 - -
Lele45g1222 339 Coils Coil 85 105 - -
Lele45g1222 339 Gene3D - 204 262 - -
Lele45g1222 339 SUPERFAMILY Homeodomain-like 203 263 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1222 Lele-ChrLele45 22267445 22269404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1222 38 280 G2-like Transcription Factor Family AT2G03500 36.502 9.13e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele45g1222 Myb_DNA-binding 6.5e-07 CL0123