Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1204 ATGATGATGATGATTCCATCGCCTTCTTCTTCTTCTTCAGCTCCTTCTCAGCCACCCCATCTTCGTTTTTACCATTGGGCCCCATCCTCTTCTCCGGCACCGGCCCCTTCTCCGGCTACCCTTGCCCCGACTCTCCTTCCGGTACCGGTAAGCGATACATCACCTCTGCCCTCAAAGTTGTCGATTGACTTCAGTCCACCACTGATTGCAATGGTGGTCGTCGTCGCCGCCGCCTTCCTCGTCGTCACCTATTCACGCCTAATCTCCCGCCACCTCATGCCTCCGATTACCCGCCTCGCTCGACGGTGGCGCCGCCTTAGGCGACGTCCTTACCTCCCCTCCTCCGCCGGCGACCTCGACTCACTCCCTTATGATTCTCCTTTTGAGCCAATGGATGGCCCTCACATGTTCTCCCCTTATGGTCTCGACGAGTCCATCATCAAGACCATACCGTTTTCCCTCTACACCGCCAAATCAAAGAATCAATTCGAAGAATCTCGAAGAGATTGCGCGGTTTGTTTGTTGGAATTCGAAGACGATGAGTATGTCCGAACGCTGCCGTTTTGTTCTCACACTTTTCATTTGGATTGCATCGACGTTTGGCTCAGGTCGCACGCGAATTGCCCTCTCTGCCGCGCCGGAGTTTTGTGCCCGGAGTCCCCGTTCCCGCCAATGATGGCGGGGAGGATTCGGCCGAGCCTCGACGACGACACGATTTTGCATAGAATCAGTATGGACCCTCTGGTCGAAGCTCCATCGCCAGTGGCTCATTCTCTGGTGTCGGAGATCACTCCTTGCAACGAAGACCAATCGCCAAGGACTAACCACGCGAATCCGGATGACGATCGATTCAACGGCGGTCGGGATTTCCTCCTTAAGCGATCCTACTCGTTTGGATTCGAACGGAGCCTGGCTTCGGAGAGAATGGTGATGGAGCCGGCGACGGCGTCACCGTGGCGGTACCACCGAAGGGGAAGCAGCAGCAGCTTCTGGAGCAAAAGGCCATCACCGTTCGGATCATTGGGAAAGTCAAGAGTGTTCTCGTTCAGATACTATAGAGGGATGAAGTCGCCGTTCTTCCGGAGACGAGGGTTCTTCCCTCTGTCGGAATCAAGCATGAGGTCATACAACGGAGTAGGAGGAGGAGGAAGCTCGTCTCGTCGAAGCAAGTCCATAGCAAGCCCGATGTTCCTGAGGTCGTCGGCGGCGTTGGCAGCGGTGGGAGCAGCAGCTTTCTCGTCGAGCCGGCTAAGGTGCGGCGACCCGGAGGCATTGCTGTCACCGGAGAGATACAACAGGAGATAG 1305 0.5609 MMMMIPSPSSSSSAPSQPPHLRFYHWAPSSSPAPAPSPATLAPTLLPVPVSDTSPLPSKLSIDFSPPLIAMVVVVAAAFLVVTYSRLISRHLMPPITRLARRWRRLRRRPYLPSSAGDLDSLPYDSPFEPMDGPHMFSPYGLDESIIKTIPFSLYTAKSKNQFEESRRDCAVCLLEFEDDEYVRTLPFCSHTFHLDCIDVWLRSHANCPLCRAGVLCPESPFPPMMAGRIRPSLDDDTILHRISMDPLVEAPSPVAHSLVSEITPCNEDQSPRTNHANPDDDRFNGGRDFLLKRSYSFGFERSLASERMVMEPATASPWRYHRRGSSSSFWSKRPSPFGSLGKSRVFSFRYYRGMKSPFFRRRGFFPLSESSMRSYNGVGGGGSSSRRSKSIASPMFLRSSAALAAVGAAAFSSSRLRCGDPEALLSPERYNRR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1204 434 FunFam RING-H2 finger protein ATL65 135 216 - -
Lele45g1204 434 PANTHER RING-H2 FINGER PROTEIN ATL16 52 231 IPR044600 GO:0016567|GO:0016740
Lele45g1204 434 CDD RING-H2_PA-TM-RING 169 212 - -
Lele45g1204 434 ProSiteProfiles Zinc finger RING-type profile. 170 212 IPR001841 -
Lele45g1204 434 Pfam Ring finger domain 169 212 IPR001841 -
Lele45g1204 434 SUPERFAMILY RING/U-box 158 222 - -
Lele45g1204 434 SMART ring_2 170 211 IPR001841 -
Lele45g1204 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 216 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1204 Lele-ChrLele45 22127814 22129118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1204 62 434 C3H Transcription Factor Family AT3G18930 51.861 6.12e-100 303