Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1186 ATGTCTTCCTCCAAGCAATCGAAGTTCGCCGGAACTCCGGTGACCTCTAACTCTATTCAGCCATCGCCTAACTTCTTCTACCACGACCACGAACACTCTGTTATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCTACCTACAGCACTATCGCGGCCACCACCTCCAGCGATCTCATCCAAGAAATTCGATTTCCTCCCACCTTTGAGTATTCCGATTCAATATCCGCAGTCACCTCAACCCCAATGGGAATTGTTCCGACCATGACTATCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGCTGCAAATTTTTTCCCGAGGAGAAAAAGAAAAGTGGAGGGAGAAGGAAGACGGCGACGACGTCATCGAAGAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCATGGGGAAAATGGGCCGCCGAGATCCGAGACCCAAGAAGGGCGGCCCGGGTTTGGTTGGGGACGTTCAATACTGCAGAGGAAGCCGCACGCGCATACGATAGCGCGGCAACGGAATTTCGCGGGCCGCGAGCAAAGCTCAATTTCCCATTCCCTGATAACTCGCTGAGTGACTCGCATTCCCAAACAGAGCATATGGAAGTAGAATGCTCAGAATCCCTGTTGGAGCAAGCAGAGGAAGAAAATAGAAACTCAAATACTGGGAATTATTATGACGATGTTTGGACAATGGGAATTGAGAATAGTAAGGAAAATGAATTCTTGGACGGACTTGGAGATCCAGAATTTCAGCAGTGGATGACGATGATGATGGATTTTGGAGGAGATTCCTCAGACTCTGCTACTACTAATAGCCATAGTCCTCATATCAACACGATCGTGAAAGTGAAGGACCGCGTGGAGCGAGTGCTTGGAAGGTGGCGAGAAGATAAGGTGGGAAGAGTTGAGACAGACAGACAGATAGATGCGGCCCACAGAACATCACCTGAGGATGTGTAG 969 0.4964 MSSSKQSKFAGTPVTSNSIQPSPNFFYHDHEHSVIVEALTNVVVGSTYSTIAATTSSDLIQEIRFPPTFEYSDSISAVTSTPMGIVPTMTIETCGECKIEGCLGCKFFPEEKKKSGGRRKTATTSSKKKKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFNTAEEAARAYDSAATEFRGPRAKLNFPFPDNSLSDSHSQTEHMEVECSESLLEQAEEENRNSNTGNYYDDVWTMGIENSKENEFLDGLGDPEFQQWMTMMMDFGGDSSDSATTNSHSPHINTIVKVKDRVERVLGRWREDKVGRVETDRQIDAAHRTSPEDV 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1186 322 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele45g1186 322 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Lele45g1186 322 PANTHER DNA-BINDING DOMAIN 114 220 IPR044808 GO:0003700|GO:0009873
Lele45g1186 322 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Lele45g1186 322 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele45g1186 322 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele45g1186 322 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele45g1186 322 CDD AP2 129 187 IPR001471 GO:0003700|GO:0006355
Lele45g1186 322 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele45g1186 322 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1186 Lele-ChrLele45 22030800 22032085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1186 124 187 AP2-EREBP Transcription Factor Family AT2G33710 78.125 1.72e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele45g1186 AP2 2.5e-15 CL0081