Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1175 ATGCTTCGTGGGGTTGCGTTTTCCTTGTTTGGGCTTTTGGCCTTCTTGGGAGTACAGTTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTAAATGCTTCAAACTTTACAATGGCATCCTCTGTCTGCTCAGACCAAGGTGACAGAAATAACTGTTGTCGATACATCAATGCTAATATCGCGGTTTCTGTTGCTCGGTATGCAAATGGAACAGCCAACCTTGGAGTCCCTCCAGATGCTTCTGACTTCTGCTTCCAGACCATAACTGAGACCTTGCAACTTTATGGAGTTCCACCTAATGCAGCTGTTTTCTGTGGTTTTGGGACGAAAGTTCTGGTTAATTATGAGTGTAAAGGTCGAACTACTGTCACGCAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACTGAAAATTGCAAAGTGCCACTTGTAAAGGAAAGTGATTGCAAGAAATGTTTGAATGCTGCCATTGGTTACCTACATAATATAATAGGTGTACGAGATAATATCACATTAAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCTACTGTTGAAATCGCGAGCTGTTTCTTCGGGGTTCAGGGACTTCTCGGGCCTACCGGTACAAATGTTTCAGAGCCATCCACTTCACAAACTCCTGAGGCTTCTTCGAGTCCTCCGGCTGCTGATAGCCCGAGTCCATTGCTGTTAGGTGTACCACTTAAACGGAATCACCATAGATACCACTTGACATTAATAGCAGGTATCGGTATTGTCGTCACAGCTGTTGCGGTTATGATGGTCGTAGTCTTGATGGTCTTAATTCGTCAAAAAAGCAGAGAGTTAGAGTGGCCTGATCATTTAAGTAAAACCTCCTCAAAATCCTTACCACCTAGTGCAACATGGAGATTTCAGGATGGTCCTTCGTCTACATTTCGAAAGTTCAACTATAGTGAGATAAAGAAGGCCACGGATAATTTTAGCACTATGATTGGCCAAGGAGGATTTGGAACTGTGTATAGAGCTCATTTTAGTGATGGTTTAGTGACAGCAGTAAAGCGTATGGACAAAGCATCTGAGCAAAAGGGGGATGAGTTCTGTCGAGAAATAGAGCTCGTCGCTCGGCTTCATCACCGCCATCTAGTCGCCTTAAGAGGGTTTTGCATTAAAAAACATGAGAGGTTTCTGATGTACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCAGGGAAAACGCCTCTAAGTTGGCGAACTAGGATCCAAATTGCCATTGATGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTCTGCCACAGAGACATTAAGTCAAGCAACATCTTACTGGATGAGAAATTTGTCGCAAAGCTAGCTGATTTCGGGCTGGCACACGCTTCGAACGATGGTTCTGTATGCTTTGAACCAGTAAATACTGATATCCGGGGAACTCCCGGTTATATGGATCCTGAATATGTTGTTACTCAAGAACTCACTGAGAAAAGCGATATTTACAGTTTCGGCGTGCTGCTATTAGAGATTGTAACCGGTAGACGAGCGATTCAAGATAACAAGAATTTGGTAGAATGGGCACAACCATTCATGGAATCTGAATCAAGATTGATGGAATTAGTAGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTTCAAACGGTTGTTTCTATTGTAGGATGGTGCACACACAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTTCTTAGACATCTGTACGAGACTTCAGAACCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATAGAGAAAATCAGCAATCTGGGAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAATGGGGATGAAATATATAATCTAGCTTCTTCTTCAAGTACTTCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCCTCACAATCCCCTCAAAATATTTTTTCACTTTAA 2031 0.4249 MLRGVAFSLFGLLAFLGVQFPAIMADCPLDLNASNFTMASSVCSDQGDRNNCCRYINANIAVSVARYANGTANLGVPPDASDFCFQTITETLQLYGVPPNAAVFCGFGTKVLVNYECKGRTTVTQMLQSPRFGEVTENCKVPLVKESDCKKCLNAAIGYLHNIIGVRDNITLSTCRDATFTALASQVDDMSTVEIASCFFGVQGLLGPTGTNVSEPSTSQTPEASSSPPAADSPSPLLLGVPLKRNHHRYHLTLIAGIGIVVTAVAVMMVVVLMVLIRQKSRELEWPDHLSKTSSKSLPPSATWRFQDGPSSTFRKFNYSEIKKATDNFSTMIGQGGFGTVYRAHFSDGLVTAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLMYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDEKFVAKLADFGLAHASNDGSVCFEPVNTDIRGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTHREGRARPSIKQVLRHLYETSEPMHSGFLQAVEDEEYRENQQSGRRSKGKLHRNEPNYHNGDEIYNLASSSSTSRSYCSRSFLLETGSSQSPQNIFSL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1175 676 FunFam Putative receptor-like protein kinase 403 603 - -
Lele45g1175 676 Pfam Protein kinase domain 331 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1175 676 MobiDBLite consensus disorder prediction 616 637 - -
Lele45g1175 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Lele45g1175 676 SMART serkin_6 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1175 676 SUPERFAMILY Protein kinase-like (PK-like) 307 598 IPR011009 -
Lele45g1175 676 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lele45g1175 676 PANTHER OS01G0750732 PROTEIN 154 618 - -
Lele45g1175 676 MobiDBLite consensus disorder prediction 616 640 - -
Lele45g1175 676 MobiDBLite consensus disorder prediction 210 232 - -
Lele45g1175 676 Gene3D Phosphorylase Kinase; domain 1 305 402 - -
Lele45g1175 676 ProSiteProfiles Protein kinase domain profile. 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1175 676 CDD STKc_IRAK 333 595 - -
Lele45g1175 676 FunFam Putative receptor-like protein kinase 295 402 - -
Lele45g1175 676 Pfam SPARK 25 163 IPR043891 -
Lele45g1175 676 Gene3D Transferase(Phosphotransferase) domain 1 403 621 - -
Lele45g1175 676 MobiDBLite consensus disorder prediction 210 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1175 Lele-ChrLele45 21954885 21958684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1175 20 676 Receptor kinase-like Gene Family AT3G19300 59.394 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lele45g1175 Pkinase 3.6e-51 CL0016