Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1171 ATGGGGAAGCTTCCCATAAACCCGCCTGATGGAAAACATTCTGGTTCTAATGCTGAGATCGATGCTGCTGCGAGGCAGAGGCGTAAGAGAATAAAAAATTTGTTTGCTAGCCTTAATGCTATGCTCCCTCATGTCCCCAAGCAGGCAGACAAAGTGACAGTGGTGGATGAAACATTGAACTACGTGAGAGTGTTGGAGCAAACTTTGAAAGACCTTGAAAAGAAGAAGATGGAACGACTTCTTCAATCGTCTGTGGTCTCTAATAATGTTGGAACTTCATCAAGAGAGGCCTTCGTAGCTGAACAAGTAGCTTCGTGTCCCTCAAGTCCACAGAATTATAATAAACCAGTAGGGTTTCGAACTTGGACTTCTGTAATCGTGGTAGTCAACATTTGCGGCCAAGATGCTCAATTCAGTGTGTGCTCTTTCAAGAATTGCGTTACCACCATCTGCTGTGTTCTCGACAAGTATAAGATTCAGGTTCTGTCTGCCCACATTTCATCTGTCAATGATCGCAGGTTCTATATGTTTCAAGCACATCTTCCAGGGGCATCATCAGCAGAGGAAACATTCAAGAAAGCTGCTCAAGAAATTATTCAGTATCTCTATTCTTGA 615 0.4325 MGKLPINPPDGKHSGSNAEIDAAARQRRKRIKNLFASLNAMLPHVPKQADKVTVVDETLNYVRVLEQTLKDLEKKKMERLLQSSVVSNNVGTSSREAFVAEQVASCPSSPQNYNKPVGFRTWTSVIVVVNICGQDAQFSVCSFKNCVTTICCVLDKYKIQVLSAHISSVNDRRFYMFQAHLPGASSAEETFKKAAQEIIQYLYS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1171 204 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 15 65 IPR011598 GO:0046983
Lele45g1171 204 SMART finulus 21 71 IPR011598 GO:0046983
Lele45g1171 204 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 25 199 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele45g1171 204 Coils Coil 55 82 - -
Lele45g1171 204 Pfam Helix-loop-helix DNA-binding domain 24 65 IPR011598 GO:0046983
Lele45g1171 204 Gene3D - 20 88 IPR036638 GO:0046983
Lele45g1171 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 77 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1171 Lele-ChrLele45 21925874 21926894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1171 25 204 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 31.878 4.52e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g1171 HLH 4.4e-05 No_clan