Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1170 ATGACTGATCTATCAAATTCAGATAACAGTACTGAAGTCAGTATGGAGAAATCCTTGAGAGAGAAGAAGAGAGATCTTAGCACATATGAAGCAGAAGATCATCGTCGTGAAGCTCATTCCTCATTAGAGAGAGAAAGAAGGAAGAAGATGAGGCTCTACATGAGAGAACTTGAAGATTTGGTCCCTTCTCTTCATGATGTTAAGGCAGACAAGGCAACCATTGTTGAAGAAACCATGAAGTACATTAAAACCCTAGAAGACATTGTTGAGAAGTTGGAGAAAATGAAGAGAGAGAAACTCGGATCTGCTTCAAACTCTGCTAATAATCCCACTGATGGATCTTATTCCTCCATGGCCACTCCTGCAGACACATCGGTTCTGCAAAACCCGATAGGGTTTCAGACTTGGATTTTTCCAAATGTGGTGGTGGGAATTTGTGGAGAAGAAGCTCAGTTTAGTCTGTTTTTTCCCAAGAATGAAGAACTGTTCAGTGCCATCTTTAATGTTCTTCATAAGCACAATATTAAGGTTTGGTCTGTCAGCATCACATCTAATGATACTAAAAGCTCCTATAAGATTCAAGCAACTGCAAATAAGCAGAATTCGGAAGATCAAGTTTCAGAGGAATTTTCATTTGAGGAAACATGCAAGGAAGCGGCAAGAGAGATATATCTTCTCTCTCCTATGTGA 690 0.3971 MTDLSNSDNSTEVSMEKSLREKKRDLSTYEAEDHRREAHSSLERERRKKMRLYMRELEDLVPSLHDVKADKATIVEETMKYIKTLEDIVEKLEKMKREKLGSASNSANNPTDGSYSSMATPADTSVLQNPIGFQTWIFPNVVVGICGEEAQFSLFFPKNEELFSAIFNVLHKHNIKVWSVSITSNDTKSSYKIQATANKQNSEDQVSEEFSFEETCKEAAREIYLLSPM 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1170 229 MobiDBLite consensus disorder prediction 1 45 - -
Lele45g1170 229 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 85 IPR011598 GO:0046983
Lele45g1170 229 MobiDBLite consensus disorder prediction 14 45 - -
Lele45g1170 229 Pfam Helix-loop-helix DNA-binding domain 35 86 IPR011598 GO:0046983
Lele45g1170 229 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 23 225 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele45g1170 229 Gene3D - 16 100 IPR036638 GO:0046983
Lele45g1170 229 Coils Coil 75 95 - -
Lele45g1170 229 CDD bHLH_AtbHLH_like 39 93 IPR045239 -
Lele45g1170 229 SMART finulus 40 91 IPR011598 GO:0046983
Lele45g1170 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1170 Lele-ChrLele45 21923422 21924318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1170 14 225 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 31.641 1.07e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g1170 HLH 9.1e-11 No_clan