Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1164 ATGTCATACTTCAAGTTTGCGGAGGGAATTAGGGTTTTTGGCGACACAACAATGGAGCAATCCCAGAATCAAGCGCTCGAACAAGTTCAGTGCTTCGGCCGCAAGAAGACTGCCGTGGCCGTCACCTACTGCAAGCGTGGTCGTGGGCTCATCAAGATCAATGGTTGCCCAATTGAGTTGGTGCAGCCGGAGATCCTCCGATTCAAGGCATTCGAGCCGATCCTTCTCTTGGGGAAGCATCGATTTGCCGGCGTCGACATGAGAATCCGTGTCAAAGGAGGCGGTCACACCTCGCAGATATACGCAATAAGACAGAGTATTGCCAAGGCCCTGGTCGCGTTTTACCAGAAGTATGTTGACGAGCAGAGCAAGAAGGAGATCAAAGACATCCTTGTTAGGTACGACAGAACTCTGCTGGTTGCTGATCCCAGGCGCTGCGAGCCTAAGAAGTTCGGTGGTCGTGGTGCTCGTGCAAGGTTCCAGAAGTCCTACCGTTGA 498 0.5261 MSYFKFAEGIRVFGDTTMEQSQNQALEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVQPEILRFKAFEPILLLGKHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1164 165 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 165 IPR020568 -
Lele45g1164 165 PANTHER RIBOSOMAL PROTEIN S9 18 162 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele45g1164 165 Pfam Ribosomal protein S9/S16 33 165 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lele45g1164 165 FunFam 40S ribosomal protein S16 21 165 - -
Lele45g1164 165 Gene3D - 18 165 IPR014721 -
Lele45g1164 165 ProSitePatterns Ribosomal protein S9 signature. 93 111 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1164 Lele-ChrLele45 21893438 21895027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1164 25 165 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 90.780 4.17e-94 267