Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1148 ATGGACATCTTCTCTTTCGGTCTTCTTTCACTCTTGTTATTATCTCCTTCTTCCTTCCTTCACTCTTCACTCTCTGCTTTTTCTTCTGAGCTCCCTTGCTCTGGAAGAGAAGCATTACAGAACATCACCGGAGAAGCAGGGGATGCCCCTGCTCCTTCCCCTTACGACGACCCTCCTCCCACTAACCGCGGCTGCTCCACTCCGCTGCCTCCGCTACTGAGTCTCCGGCTGGAGAAAGCACGCCGTGTGCTTCTGCAATTCGCAGCAACACTCAACGACCCCACCGGCTTTACCAAAAACTGGAAGGAAGGTGTCAGTCCTTGTGAATACAGAGGAGTTAAATGCGATAAGTTTCCTAATTCAGACGAGCTCGCCGTTTCAGGATTAGATTTCAACCAAGCGGGTTTCTCTGTTCGTCAAGGTTCTTCTTTATTCTTGGATCTCACTGTAATCCTCGGAATCCCAGAATTAACATTCTTCCATGTCAACTCCAACAACTTCTCAGGATCAATCCCCAAAGAAATCATTCGATACCCATTTTTCTACGAGCTCGATTTAAGCAACAACAAGCTCGAAGGTTACTTCCCATGGCAAGTTCTCTTTGCCCGACAGCTCATTTTCTTAGATCTCAGGTTCAATAGCCTCACTGGACCGGTCCCTCCATTTCTCTTCTTTCTGGATCTCGACGTCATCTTCATCAACAACAACAACTTCTTCGGCTACCTTCCATGGAATTTCGGGGCCACACCTGCGAGATACCTCACTTTCGCAAACAACAAGTTCACCGGACCAATCCCAAGAAGCATAGGACTCGCATCAAAGACGTTAACCGAAGTTCTGTTCTTGGGTAACCAGTTTTCTGGGTGCTTACCTTTTGAAATAGGGTTCCTGAAAAACGCAGTAGTTTTCGATGTGAGCAAGAACTCATTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTAGAGAAGATTCAGTTCTTGAATTTAGCTAACAACAAATTCTACGGCGCTGTTCCAGAATCAGTGTGCGAGCTTCCTGGGATTCGTAACGATGGGAATTTTTCCTTGGCGGGTAACTATTTCACTGAAGTTGGACCTGAATGCAAGAAACTGATAAAATCGAAGGTCCTTGATGTAAGCCAGAATTGCATAAAGGGGCTTCCCAATCAGAAATCGGCTGAAGAATGTGAAAAGTTTTTGTCTTGTGTGAAGCCGTGTCGGAATTCAAGGTCTCTCACTTTTGTCCCATGTAAGAAATACGATCACAAGAACGTTGAAACGGCTTCTTCTACGCCTCCTGCTCCTGTGACATACGAGTCTCTGAAGCCAATACGACACCGTTTAATGTGA 1350 0.4615 MDIFSFGLLSLLLLSPSSFLHSSLSAFSSELPCSGREALQNITGEAGDAPAPSPYDDPPPTNRGCSTPLPPLLSLRLEKARRVLLQFAATLNDPTGFTKNWKEGVSPCEYRGVKCDKFPNSDELAVSGLDFNQAGFSVRQGSSLFLDLTVILGIPELTFFHVNSNNFSGSIPKEIIRYPFFYELDLSNNKLEGYFPWQVLFARQLIFLDLRFNSLTGPVPPFLFFLDLDVIFINNNNFFGYLPWNFGATPARYLTFANNKFTGPIPRSIGLASKTLTEVLFLGNQFSGCLPFEIGFLKNAVVFDVSKNSLTGPIPESFACLEKIQFLNLANNKFYGAVPESVCELPGIRNDGNFSLAGNYFTEVGPECKKLIKSKVLDVSQNCIKGLPNQKSAEECEKFLSCVKPCRNSRSLTFVPCKKYDHKNVETASSTPPAPVTYESLKPIRHRLM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1148 449 MobiDBLite consensus disorder prediction 52 66 - -
Lele45g1148 449 Gene3D Ribonuclease Inhibitor 77 250 IPR032675 -
Lele45g1148 449 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 27 433 - -
Lele45g1148 449 Gene3D Ribonuclease Inhibitor 251 415 IPR032675 -
Lele45g1148 449 Pfam Leucine rich repeat N-terminal domain 80 116 IPR013210 -
Lele45g1148 449 MobiDBLite consensus disorder prediction 44 67 - -
Lele45g1148 449 SUPERFAMILY L domain-like 78 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1148 Lele-ChrLele45 21802083 21803432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1148 62 401 Leucine-rich Repeat extension Gene Families AT3G24480 40.870 1.03e-70 230