Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1144 ATGGATTCTGTGACTGCTGATACAGCTAATTTACCTCCTACTAAAGATCCATCTACTTCACCTTCTGTTAAAGATCGCGAAGGACAAACTGCTCCCCCTGCAGTCTCTGGGCAAGAAAATTCTTCACATGTGACATCACCTACGCAATCTTCCACTGGCATTTCATCATGGGCTAGAAATCTGAAAATTCCCCAGCCATTTTCTGGCTCTCATGATGATCCAGCAAGTGAAAATGCTGGGAAATCTACTTTTTCACGCTTCACTAATAGTTTAACAATGCGGTTGTCTCCAAAACCATCTTCATCAGATGACAACTCCAATGAAGCTGCTGCTCAATCTAATTTGATTGAAAGTTTTGCAAAGGGTCTAGTCGACTCTTCTAGAAATGCTGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGTCGATACCAGGAGGGAGGATTTGATCTAGATATGACATATATCACGGAAAACATTATAGCTATGGGATTTCCTGCTGGTGACATGAGCTCTGGGTTCTTTGGTTATGTAGAAGGGCTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAGACCCATCATAAGGGTAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTATTTGAGGGGAAGGTGGCCAGTTTCCCATTTGATGACCATAATTGCCCACCAATGCAACTGATTATATCATTTTGTCAAAGTGCTTACGCATGGTTGAAGCAAGACATAGAGAATGTTGTGGTTATCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTGAAGTTCTTCCCAACTACTGAGGAGTCCATTGACTACTACAACCAGAAAAGGTGTTTCGATGGAAAAGGACTTGTTCTACCAAGTCAGATTAGATACGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGAGAAAATCCTCCTGCCCGCAGATGCATGCTTAGGGGATTCCGACTTCACAGGTGCCCTTACTGGATCAGGCCTTCTATAACTGTATCAGATCATAGTGGTGTCTTGTTCTCAACTAAAAAGCATCCAAGAACCAAGGATCTTAATCCAGAAGATTTTTGGTTCAGTGCACCAAAGAAAGGAGTGATGGTCTTTGCATTGCCTGGGGATCCTGGTCTTACAGAGGTAGCCGGGGACTTCAAAATTCATTTTCATGATCGTCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACCGAAAACAGGAAAATATTGAACACCAGTGATCTTGATGGTTTTGACAAGAGAAAATTACCTTCACCTGGATTCCTGGTTGAGGTTGTGCTTGTGGATTATAATGGCAATGTCACTACATCCAAACCTGAAACTGTATCCAATAGTTCAGATGAGAGGTCAAGTAGTATTCCTACCCCAGTTGATGCAAGCACCACAGCTCCAAAAGCTGAAAAAGAGTCAGAGAATCGTGATAAAGAGGATGATGTGTTTTCAGATGGCGAGTCAGAGGATTCTACTTCAAGAAGCAGCAGGCAGTCTAAAGCAGCTTCTGTAGCAGCTACTAATCCTAATCCTACCACTGTATCTGAGACCAAAACTTCAAGTGAGATGACAAGTTTAACGCGTGGCACGGAACAAATTTCTTTAGGACCTTCGAGCACGACTCCGATTCCTAGTGGTAGTAAGCCAAAACGTGAAGATGCAAGAACAATGTCCAGTGTGGAAGCTCCCAGCGCAGAAAGTGAATTTAAGGCAATGGCTGCAGATGCTTCTGTGTTTACGTTTGGGGATGATGAAGACTATGAAAGTGAGTGA 1854 0.4202 MDSVTADTANLPPTKDPSTSPSVKDREGQTAPPAVSGQENSSHVTSPTQSSTGISSWARNLKIPQPFSGSHDDPASENAGKSTFSRFTNSLTMRLSPKPSSSDDNSNEAAAQSNLIESFAKGLVDSSRNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGLYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPMQLIISFCQSAYAWLKQDIENVVVIHCKAGMARTGLMISSLLLFLKFFPTTEESIDYYNQKRCFDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNPEDFWFSAPKKGVMVFALPGDPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKILNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTSKPETVSNSSDERSSSIPTPVDASTTAPKAEKESENRDKEDDVFSDGESEDSTSRSSRQSKAASVAATNPNPTTVSETKTSSEMTSLTRGTEQISLGPSSTTPIPSGSKPKREDARTMSSVEAPSAESEFKAMAADASVFTFGDDEDYESE 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1144 617 MobiDBLite consensus disorder prediction 1 109 - -
Lele45g1144 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Lele45g1144 617 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Lele45g1144 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Lele45g1144 617 MobiDBLite consensus disorder prediction 71 109 - -
Lele45g1144 617 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Lele45g1144 617 SMART PTEN_C2_2 331 459 IPR014020 -
Lele45g1144 617 MobiDBLite consensus disorder prediction 464 595 - -
Lele45g1144 617 MobiDBLite consensus disorder prediction 464 489 - -
Lele45g1144 617 MobiDBLite consensus disorder prediction 522 573 - -
Lele45g1144 617 MobiDBLite consensus disorder prediction 494 521 - -
Lele45g1144 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 574 - -
Lele45g1144 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Lele45g1144 617 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Lele45g1144 617 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Lele45g1144 617 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Lele45g1144 617 MobiDBLite consensus disorder prediction 33 63 - -
Lele45g1144 617 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1144 Lele-ChrLele45 21772560 21776909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1144 4 617 Protein tyrosine phosphatase (PTP) family AT3G19420 64.687 0.0 827