Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1135 ATGGAGGCGTTGCGGGGAGATGTGGATCGGGTTAAGGGTCCCTGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCAACGGCACGGCGCTCGAAATTGGTCTGCGATAAGCAAGGTTATCCCCGGACGATCTGGAAAGTCGTGCCGGCTCCGATGGTGCAACCAACTATCACCGGATGTAGAGCGCGTTGCCTTCACTCCCGAGGAGGATGAGATCATTGTCAAGGCACACGCCAAGTTCGGCAACAAATGGGCCACCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCCGTCAAGAACCACTGGAACTCGACGTTGAAGCGCAAGCACTCGTCATTGGTCGGCGACGTTGAAGATCCATCGCTCCAACCAGCGAAGAAGCCGGCCACCAGAGATCGATCGCTCACGATTCCACCGGTATTAGCGAGTCATTGCAGCCCGAGCAGCCAAACTGGATCCGATGTAAGCGATTCCGGTCATCAGGTAGTCTCTAATCCTCCGACTCTGATTCTGCCTGAATCAAAACCGCTGGATGCGATCTTGAACAACGATCTCTCAACAAAACTCACTCTGTCTCCTCCTGGATTCGAGTCGATGGAGTTACGGAAGGTTAAAGATTCAGTAGCTATCGCAGAGCATGAGAAGGCATTAACAGCAGCTATATTATCATCAACGGAGAAGAAGCAGAGTGGAATCATGACATTTGGGCCAGAGTTAGTGGCAGTGATGAAGGAGATGATAAGGGATGAAGTGAGAAATTACATGGCGGCGTTGTGA 786 0.5267 MEALRGDVDRVKGPWSPEEDELLRQHVQRHGARNWSAISKVIPGRSGKSCRLRWCNQLSPDVERVAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKHSSLVGDVEDPSLQPAKKPATRDRSLTIPPVLASHCSPSSQTGSDVSDSGHQVVSNPPTLILPESKPLDAILNNDLSTKLTLSPPGFESMELRKVKDSVAIAEHEKALTAAILSSTEKKQSGIMTFGPELVAVMKEMIRDEVRNYMAAL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1135 261 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Lele45g1135 261 FunFam Transcription factor MYB44 66 112 - -
Lele45g1135 261 MobiDBLite consensus disorder prediction 142 172 - -
Lele45g1135 261 SMART sant 11 60 IPR001005 -
Lele45g1135 261 SMART sant 63 111 IPR001005 -
Lele45g1135 261 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Lele45g1135 261 CDD SANT 14 56 IPR001005 -
Lele45g1135 261 Gene3D - 65 135 - -
Lele45g1135 261 MobiDBLite consensus disorder prediction 144 171 - -
Lele45g1135 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Lele45g1135 261 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele45g1135 261 CDD SANT 66 109 IPR001005 -
Lele45g1135 261 FunFam MYB transcription factor 12 63 - -
Lele45g1135 261 Gene3D - 11 63 - -
Lele45g1135 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Lele45g1135 261 Pfam Myb-like DNA-binding domain 15 73 - -
Lele45g1135 261 PANTHER MYB PROTEIN-RELATED 12 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1135 Lele-ChrLele45 21718968 21719753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1135 9 261 MYB Transcription Factor Family AT5G67300 47.101 7.33e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele45g1135 Myb_DNA-bind_6 3.5e-18 CL0123