Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1120 ATGATCTTCATCCCGGAAGATGATGATGGTGATGTAAGCCCAGAACCAGAAGAGCGGTTGAACCTGAGTTTAGGGGGAACACAGCTTTCAGCAGCAGCAGCAGCAACATCAGAATCATCATCATCACGATCATCAAATGCGAAAATCTTCTCGTGTAACTTCTGCATGAGGAAGTTCTTCAGTTCACAGGCCTTAGGGGGACACCAGAACGCACACAAAAGGGAAAGAGGAGCTGCAAGAAGGTATAATCAGACTCAGAAGATGATGATGACGACGACGACGAAGGGTTTGTCCATGTTTCGATCACTTGGAGTTCAGCCTCATTCACTGGTTCACAAGCCTTGCAAAGCAGGAGGAGGAACAAGAATAGTGCCACCTAGCGTTGTTGGAGTGGGATTGAAGAACTGTTTCATTGCTGATGATGAGGATCAAGTTGATTTGGTTTGGCCTGGAAGCTTTCGGTTGGATCCACAACAACAACACGCTGACCCACCTAAAGACTCAGTCAAGCTGGATCTAGACCTTCGACTCTGA 534 0.4719 MIFIPEDDDGDVSPEPEERLNLSLGGTQLSAAAAATSESSSSRSSNAKIFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYNQTQKMMMTTTTKGLSMFRSLGVQPHSLVHKPCKAGGGTRIVPPSVVGVGLKNCFIADDEDQVDLVWPGSFRLDPQQQHADPPKDSVKLDLDLRL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1120 177 Gene3D Classic Zinc Finger 29 101 - -
Lele45g1120 177 PANTHER ZINC FINGER PROTEIN 4-LIKE 12 177 - -
Lele45g1120 177 SUPERFAMILY beta-beta-alpha zinc fingers 47 76 IPR036236 -
Lele45g1120 177 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Lele45g1120 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 77 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1120 Lele-ChrLele45 21601026 21601559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1120 45 154 C2H2 Transcription Factor Family AT1G24625 40.164 4.08e-20 81.6