Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1105 ATGATGATGATGATGATGCGTTCGTTTTGTGGCTCGCTGGAACGCTGTTTTGGCGGGTTTGGAGGTGGAAGCGACTGTCTTCTCTGGCACTCGGACTTGAAGCCGCACGCCTCCGGTGATTTCTCAATCGCCGTCGTTCAAGCCAATTCCAGCCTCGAAGATCAGAGCCAAGTCTTCACGTCTCCCTCCGCCACCTACGTCGGTGTTTACGATGGCCACGGCGGTCCTGAAGCTTCCAGATTTGTTAATAAACGCCTCTTTCCTTATTTACAAAAATTTTCCGCTGAAAATGGGGGATTATCAGTGGATGCGATCAAAAAGGCGTTTCATGCAATCGAGGAGGATTTCTTGAGCTTGGTGAAGCAATCGTTGCACACAAGTCCCCGAATTGCTTCCGTAGGATCGTGTTGTCTTCTTGGTGCAATTTCTGATAATGTATTATATGTTGCGAACCTTGGTGATTCAAGAGTAGTTCTTGGCCGGAGAGATTTGGGGGGCGACAAGCATCCGGTGGTGGCGCAACGGTTGTCAACTGATCATAATGTATCTGTTGAGGAGGTGAGGAGAGAGGTCAAATCTCTTCATCCTGATGATGAACACATTGTAGTTTTTAGTCGTGGAACTTGGAGAATTAAAGGCATTATACAGGTGTCAAGATCTATAGGTGATGTGTATCTCAAGAACCCTGATTGTTGTAGCAGCCCTATTCCTTTGAAACGTCCTGTAATGACGGCTGAACCATCAGTCATTGTCAGGGAGCTTGAGTCACAAGATTTGTTTCTGATATTTGCATCAGACGGCCTTTGGGAACAATTAACTGATGAAGAAGCAGTTGAGATTGTTTACAAATATCCAAGAGCAGGAATTGCCAGGAGATTGGTGAGAGCTGCTCTTGAATCAGCAGCAAAGAAGAGAGAGATGAGATATAAGGACATGAGGAAAATTAACAGGGGAGTAAGAAGACTTTTCCATGATGACATCACTGTTATAGTAGTGTATCTTGATCACCGAAAAGTTAAGAAAAATGCTGTCTGCTCCATAAGTGCTCCTATGGATATTTTCTCCCTAAATTCAGATGAAACAGAACAGAGTATCTTTCGTACGGTTGCCTGA 1113 0.4474 MMMMMMRSFCGSLERCFGGFGGGSDCLLWHSDLKPHASGDFSIAVVQANSSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLQKFSAENGGLSVDAIKKAFHAIEEDFLSLVKQSLHTSPRIASVGSCCLLGAISDNVLYVANLGDSRVVLGRRDLGGDKHPVVAQRLSTDHNVSVEEVRREVKSLHPDDEHIVVFSRGTWRIKGIIQVSRSIGDVYLKNPDCCSSPIPLKRPVMTAEPSVIVRELESQDLFLIFASDGLWEQLTDEEAVEIVYKYPRAGIARRLVRAALESAAKKREMRYKDMRKINRGVRRLFHDDITVIVVYLDHRKVKKNAVCSISAPMDIFSLNSDETEQSIFRTVA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1105 370 FunFam Probable protein phosphatase 2C 42 31 342 - -
Lele45g1105 370 PANTHER PROTEIN PHOSPHATASE 39 333 - -
Lele45g1105 370 SUPERFAMILY PP2C-like 47 336 IPR036457 -
Lele45g1105 370 SMART PP2C_4 30 332 IPR001932 -
Lele45g1105 370 Pfam Protein phosphatase 2C 61 303 IPR001932 -
Lele45g1105 370 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
Lele45g1105 370 Gene3D - 31 344 IPR036457 -
Lele45g1105 370 CDD PP2Cc 47 334 IPR001932 -
Lele45g1105 370 ProSiteProfiles PPM-type phosphatase domain profile. 40 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1105 Lele-ChrLele45 21482392 21484649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1105 22 350 PP2C-type Phosphatase Gene Family AT3G51370 54.203 1.12e-134 387