Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1101 ATGCCACGCGCTCCGTCCTCAAACGTCAGGGACAGGGTCACGGAGCTCCGTGATCTTTCCGCCTATAACTCACCAAGAGGCCAGAGCAGTGCGTATGCTGATGCAATGAGTAAAAATATGGTTGATGCTTTGCATGGAGTGCATCACACAGGTGGTGATCTTGTTGTTGTTAACCCTAAAAAGGATGTTCTGTTGTATGAAGGGGACAGAGATTTTGAGCCACACAAAGGCATTGAATTTGATTCTCATGAAGCAGCATATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCGATAAAAAACAGCAGACGTTCAAAGAAAACCAAAGAATTTATTGATGCCAAATTTGCTTGCTCTAGATATGGATTTACTCCCGAGTCAGATAGTGGGAGTAGTCGAAGGCCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGTCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTTTGGCGTATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAACATTGATATATTGCATGCTGTCAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAAGCAATCTAGTGGCTGTCATAATTTTGGGTCTCTTCTCAGTGATGTAAATTATCAGTTTGAAAGAGGCCAACATTTGGCTCTGGATGAGGGAGATGCTCGAGTTATTCTTGAGTATTTTAAGCATATCCAAAAGGAGAATCCTAACTTCTTTTATGCTATTGATTTGAATGAAGAACAACGATTGAGGAATTTGTTTTGGGTTGATGCAAAGAGTAGGAGTGATTATGTCAGCTTTAATGATGTAGTTTCATTTGATACTTCTTACATCAAAAGCAATGACAAGTTACCATTTGCTCCTTTTGTTGGAGTGAACCATCACTGTCAACCCATATTGCTTGGATGTGCGTTGGTTGCTGATGAGACGAAACCAACTTTTGTTTGGGTGATGAAGACATGGCTTAGAGCAATGGGCGGGCAAGCTCCTAAAGTCATAATCACTGATCAAGACAAAGCCTTGAAGGCGGCAGTTGAAGGAGTTTTTCCAGATGCCCGCCATTGCTTTTCTCTTTGGCATGTACTTGATAGGATTCCGGAAAATCTTTCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCGAAGTTTGACAAGTGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTTCAGGATGATGTATGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCCACTTATATGGGGGATACCTTTTTAGCTGGAATGTCTACTGCTCATCGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATTCATAAAAAAATTACTGTTAAAGAGTTTGTGAAACAATATGGGACAATTCTTCAGAATAGGTATGAAGAGGAAGCTCATGCAGATTTTGATACATTGCACAAACAGCCAGCACTCAAGTCTCCTTCTCCTTGGGAAAAACAAATGTCAACAGTTTATACGCACACGATCTTCAAGAAATTCCAAGTTGAAGTTTTGGGTGTCGTTGGCTGTCATCCTAGGAAAGAAAGTGCAGATGGAAGCATCGCAAAATTTGTAGTTCAAGATTGTGAGAAGGAGGAAGAGTTTTTGGTCACTTGGAATGAGATGAACTCAGAGGTTTCATGCTTCTGTCGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCATTGAATGTTCTCCAACTTTGTGGCTGTTCAAGTATCCCATCTCACTACATTTTAAAAAGGTGGACCAAAGACGCGAAAAGTAGGGTATCAATCGTGGAAGGAACTGAAAGGATCCAAACTAGGGTGCAACGTTATAACGACTTGTGTAAAAAAGCTATTGAATTGAGTGAGGAAGGATCGTTATCTGAAGAGAGTTATGATGTTGTTTTCCGTGCACTTGTTGATGCCCTGAAGAATTGTGTACACGTGAATAATTCTAACAACAATAATGCAGAAACCAGCAACAATTCTCTTGCCCTACGTGAAGCCGAAGCAAATCAGGTTAACATTACCACAAAAACAACTAAAAAGAGGACCCCAGCTAAGAGAAGAAAGGTACAACAAGTGGATACCGATATGATACTTGTCGATGCACAAGACAGCTTGCAACAGATGGATAACCTTAGCTCGGATGGAATGACCCTTAATGGATATTATGGCGCCCAGCAAAATGTGCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTTAATCAACAGAGTATGCAAGGCCTTGGCCAATTGAATTCTATGACCCCGAGCCACGACGGTTTTTTTGGGACACAGCAAAGCATTCATGGGCTGGGGCCATTGGAGTTTCGTCCACCGACCACTTTTGGATATACCCTGCAGGATGAGCCTGATCTGAGGCCTGCTCAGTTTCATGGCAGCAGCTCAAGAAATACATAG 2556 0.4085 MPRAPSSNVRDRVTELRDLSAYNSPRGQSSAYADAMSKNMVDALHGVHHTGGDLVVVNPKKDVLLYEGDRDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDSGSSRRPSVKKTDCKACMHVKRRSDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCHNFGSLLSDVNYQFERGQHLALDEGDARVILEYFKHIQKENPNFFYAIDLNEEQRLRNLFWVDAKSRSDYVSFNDVVSFDTSYIKSNDKLPFAPFVGVNHHCQPILLGCALVADETKPTFVWVMKTWLRAMGGQAPKVIITDQDKALKAAVEGVFPDARHCFSLWHVLDRIPENLSMVIKRYKNFLPKFDKCIFKSWTDEEFDMRWWKMVTRFELQDDVWFQSLYEDRKKWVPTYMGDTFLAGMSTAHRSESMNSFFDKYIHKKITVKEFVKQYGTILQNRYEEEAHADFDTLHKQPALKSPSPWEKQMSTVYTHTIFKKFQVEVLGVVGCHPRKESADGSIAKFVVQDCEKEEEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRVSIVEGTERIQTRVQRYNDLCKKAIELSEEGSLSEESYDVVFRALVDALKNCVHVNNSNNNNAETSNNSLALREAEANQVNITTKTTKKRTPAKRRKVQQVDTDMILVDAQDSLQQMDNLSSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMTPSHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDEPDLRPAQFHGSSSRNT 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1101 851 Pfam MULE transposase domain 295 387 IPR018289 -
Lele45g1101 851 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 684 IPR031052 GO:0006355
Lele45g1101 851 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
Lele45g1101 851 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Lele45g1101 851 Pfam SWIM zinc finger 584 610 IPR007527 GO:0008270
Lele45g1101 851 SMART 26again6 586 613 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1101 Lele-ChrLele45 21456688 21460974 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lele45g1101 MULE 3.1e-23 CL0219