Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1093 ATGAGTTGCAGTGGTTGTCGTGTTCTCCGGAAACGATGCAGCGACGAGTGCATGCTCCGGCATTGCCTTCAGGGGATCCAAGACCCTCAAGCCCAAGCCCACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGTGCCGGCCTCATGTCTTTGGCCTCCGCCGTTCCCCCCTCCCAAAGACCCCATTTGTTTCAGTCGTTGTTGTATGAAGCGCTGGGACGCACCATAAACCCAGTAAATGGAGTGGTGGGGCTTCTCTGCACAGGGAAATGGCATCTCTGCCAGCTGGCGCTGGAGACGGTGCTCCGTGGCGGCACGTTGAGTCCACTTCCTCCGGGTTTCTCCATTGTTGGTGGCTGCGGCAGAGGTAGATCAGTTCCGGCGGAAGATGAGAGTTTCGGGTCTGCCATGAATACTTGTACCAATCACAGGAACATGAAGATGTTAAAGAGAAAGGTAATGAGTGGTTCTAATATTGATGACGTGGAGAGTTCTCAAGCACGTGATCGGAGGATGCCGGAGAGAGCGAAGAAGCACCGAGCAGTGACGCCGTCCACGGAGGAGCCTGAAACGACCACGTTTGGGAGTGCTGAAAGGAGACTCCTAAGACTATTCTATTGA 621 0.5507 MSCSGCRVLRKRCSDECMLRHCLQGIQDPQAQAHATLFVAKFFGRAGLMSLASAVPPSQRPHLFQSLLYEALGRTINPVNGVVGLLCTGKWHLCQLALETVLRGGTLSPLPPGFSIVGGCGRGRSVPAEDESFGSAMNTCTNHRNMKMLKRKVMSGSNIDDVESSQARDRRMPERAKKHRAVTPSTEEPETTTFGSAERRLLRLFY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1093 206 MobiDBLite consensus disorder prediction 163 185 - -
Lele45g1093 206 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Lele45g1093 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 192 - -
Lele45g1093 206 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lele45g1093 206 MobiDBLite consensus disorder prediction 154 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1093 Lele-ChrLele45 21405246 21406086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1093 1 147 AS2 family AT3G49940 61.905 1.93e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele45g1093 LOB 1.5e-24 No_clan