Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1088 ATGATCGATTATTTTAATGCACACCAAGTGTTTGAAGTGGGTCCTCTGAGAATTTCAAGTGGTCCCATCAAGGGCTTGGGACTGAAATTTGATTCCAAAGTACTAGGACTTTGTCTTATGCTGATTATTGGTGATGATGAAACCAATCCCTGTCTTGTCTTCTATTTCATTTCTGCTAGTTGGCTTCAAAGAAAAATGGAGGCTTGTGGGAGGATTTCTGAAGAGTGGAGCTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTCATGAATCAACTTCTTGGTAACAACTGTTCAGTCCCAGAAGAACTTCTATATGAAAATTCAACTTTGGGATTTCCATGTGGGTTTTGGCCTGGACATGATTCAACAGTTGTGAGCGTCACAGGCATCAATCACAACAACACTTCATATTTTCCTTCCAACGACGCTAATTTTTTCAGTTTCTCATCACAAGGCAGTAGCCCCAGTACTGATAGTGGTGTTAGCTACCGCCTTAATGATCCATTGACCAATTTTGATGCTGTGTCCATGGATTTTTCTTTGGGGGATGCCAAAATTGTCCCATACACTGTTGAAACCAATGATCATTTGAACCATCAGATGAATGAAAATACTGATGAAGAGTCAGGTTTTGACCCAGTTGAGAGGGTTCTTGCTGTTGCTGACAAGAATTTTCAGGCTAATAAGGAATGTGAAGAACTATTTTCTTCTGAACCAGTTGAAAAGAAGTCAGAGAAAAGATCTAGGATCTCATGGGAGGTACAGAAGAACAAGAGGAATGTAAAATCAAAGAAGAATACAAACTCTGAATCTGTAAGCAAAAATGAAGAGGATAATAGGAGCTTTCAAAGGCAGAGCTCAAGCAGTTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCTAAATGTGGGGTCCACTTCAAGTTTAAGTCCTAAAGATTCTGCATCTCTCAAGTCTAATAATGTCAAATCATTGTCTGCTAAAAGTCCTGCCACTGATCCACAGAGCGTATATGCAAAAAGAAGAAGAGAAAGAATAAACGAAAGGTTGAGAATCCTACAAAACCTTGTCCCCAGTGGAACTAAGGTGGATATAAGCACCATGCTTGAGGAAGCAGTTCAATATGTGAAGTTCTTACAGCTTCAAATAAAGCTTCTGAGCTCAGATGATCTGTGGATGTATGCTCCTATCGCCTACAATGGATTGAACATTGGACTTGACCTTAACATCACACCTAAACAATCATAG 1257 0.401 MIDYFNAHQVFEVGPLRISSGPIKGLGLKFDSKVLGLCLMLIIGDDETNPCLVFYFISASWLQRKMEACGRISEEWSSLSGLYTAEEADFMNQLLGNNCSVPEELLYENSTLGFPCGFWPGHDSTVVSVTGINHNNTSYFPSNDANFFSFSSQGSSPSTDSGVSYRLNDPLTNFDAVSMDFSLGDAKIVPYTVETNDHLNHQMNENTDEESGFDPVERVLAVADKNFQANKECEELFSSEPVEKKSEKRSRISWEVQKNKRNVKSKKNTNSESVSKNEEDNRSFQRQSSSSCCSEDDSNASQELNVGSTSSLSPKDSASLKSNNVKSLSAKSPATDPQSVYAKRRRERINERLRILQNLVPSGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPKQS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1088 418 CDD bHLH_AtIND_like 334 396 - -
Lele45g1088 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 335 398 IPR036638 GO:0046983
Lele45g1088 418 MobiDBLite consensus disorder prediction 238 283 - -
Lele45g1088 418 FunFam Basic helix-loop-helix transcription factor 334 391 - -
Lele45g1088 418 MobiDBLite consensus disorder prediction 284 336 - -
Lele45g1088 418 Gene3D - 337 396 IPR036638 GO:0046983
Lele45g1088 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 382 IPR011598 GO:0046983
Lele45g1088 418 SMART finulus 339 388 IPR011598 GO:0046983
Lele45g1088 418 Pfam Helix-loop-helix DNA-binding domain 343 383 IPR011598 GO:0046983
Lele45g1088 418 MobiDBLite consensus disorder prediction 238 343 - -
Lele45g1088 418 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 201 391 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1088 Lele-ChrLele45 21343533 21345264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1088 66 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 40.267 2.97e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele45g1088 HLH 1.4e-08 No_clan