Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1066 ATGTCTCTTTCATCGGAGTACTCAACCGCCGGTTACTTGTTCTGCCCCGAGGACGCCGCCGACGTCTTCTACTCCGGTGAAGATGCGTCGATCTTCCGCGACCCTCCACCACCATCATCTTACCTCACGCCCTATTCTCCGCCGTCCGATGAGATCGGCGAACTCATTGACGCAGAGCACCTCATACCGAACCAAGATTATCTGCATCGCCTCCGTGACTGTCCGATCGACTTCACCAATCGCGAGAAGTCCATTAACTGGATCTTCAAGGTGCACGCCTTCTACCAGTTTCGTCCAGTAACGGCGTCACTCTCCGTCTACTATTTCGACCGATACCTGTCGTGCTCTTCTTCTCTTCCGCCAGCTGGGTGGCCGTTTCATCTATTATCAGTGGCGTGCTTGTCTCTTGCAGCGAAAATGGAGGAGTCTCGAATCCCGAACTTGCTAGACCTGCAAATATTCGATCCCGGTCTCGTATTTGAATCCAAGTTGGTTCAGAGGATGGAGCTCCGGCTCTTGACCCAACTCAACTGGAGATTGCGCTCTGTCACTCCCTTCGACTACCTCCATTACTTCTTCTCCAAGCTCCCTTCGTCCTCATCCGATCCTAAACCCGGATCGGCGACCCGGCTCTTCAGAGCCTCCCAGTTCATTCTCACCACCACTCGTGGGATTGATTTCTTAAGATTCACACCGTCGAGTATTGCAGCTGCCGCCGTGCTCTGTTCAGCCGGCGTAGCCTGTGACGTCTCCCTCCAAGCACTGCCGTGTTTTCATGACAGAATGAACAAAGAAATGGTGAGAAGCTGTCATCGACTAATGGAGGCGTACGTGGATGACACGTGTCGCGGGGACGAGGCGGCTCCTCCTTCAAGCCCCATTGGCGTGCTTGAAGCCGCCACTCATGCCAGCTCCAGCACCCATTCTGAAAACGCAAGCTCCAGCTCCACCCAAACCGACCTCCCGCCACGGAGGAAGCGTCTGCGATCCTCTGCGCCGAATGTACAGGCGGTAGACCGCCTGTGGTAG 1029 0.552 MSLSSEYSTAGYLFCPEDAADVFYSGEDASIFRDPPPPSSYLTPYSPPSDEIGELIDAEHLIPNQDYLHRLRDCPIDFTNREKSINWIFKVHAFYQFRPVTASLSVYYFDRYLSCSSSLPPAGWPFHLLSVACLSLAAKMEESRIPNLLDLQIFDPGLVFESKLVQRMELRLLTQLNWRLRSVTPFDYLHYFFSKLPSSSSDPKPGSATRLFRASQFILTTTRGIDFLRFTPSSIAAAAVLCSAGVACDVSLQALPCFHDRMNKEMVRSCHRLMEAYVDDTCRGDEAAPPSSPIGVLEAATHASSSTHSENASSSSTQTDLPPRRKRLRSSAPNVQAVDRLW 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1066 342 SUPERFAMILY Cyclin-like 60 180 IPR036915 -
Lele45g1066 342 MobiDBLite consensus disorder prediction 300 342 - -
Lele45g1066 342 Pfam Cyclin, N-terminal domain 60 180 IPR006671 -
Lele45g1066 342 FunFam D6-type cyclin 177 272 - -
Lele45g1066 342 PANTHER CYCLINS 57 275 IPR039361 -
Lele45g1066 342 Gene3D - 59 247 - -
Lele45g1066 342 MobiDBLite consensus disorder prediction 300 321 - -
Lele45g1066 342 SMART Cyclin_C_2 183 318 IPR004367 -
Lele45g1066 342 SMART cyclin_7 86 174 IPR013763 -
Lele45g1066 342 CDD CYCLIN 80 173 IPR013763 -
Lele45g1066 342 Gene3D - 64 181 - -
Lele45g1066 342 FunFam D6-type cyclin 64 176 - -
Lele45g1066 342 Pfam Cyclin, C-terminal domain 183 278 IPR004367 -
Lele45g1066 342 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1066 Lele-ChrLele45 21209811 21211421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1066 1 283 Core Cell Cycle Gene Families AT1G70210 39.863 3.34e-59 192