Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1040 ATGGTTTATACCGACACAGTTATTGGAAGAGCAGGTTCTGCAGAAGAGTTCACATCGAGCGTTAGAGCCGCCGTAGTTATGTTTGTACCAATTGCAATGGCTGCAGCTTTTTCGGGTTTTGCAAGCTATGGGAAGTTGATTAATGGCAAGGAGATAGCAGTTAAAAGGCTTTCATTCAAAACAAGGCAAGGCCTTGAAGAGTTCAAGAATGAAATGACATCGATAGCAAAACTTCAACACAAAAATCTTGTGAGGCTTTCGGGGTTCTGTCTGGAAGAAAATGAAAAGCTTCTAGGCTATGAATACATGCCCAACAATAGCCTTGATACCTTCTTGCATGGCGACTCTGGAATGAAGGCAAAGGACTTGAACTTGTGGAGCCTGAATTGTTCAACAGTTGCAGTGATAAGGATGAAGCTTTAA 423 0.4208 MVYTDTVIGRAGSAEEFTSSVRAAVVMFVPIAMAAAFSGFASYGKLINGKEIAVKRLSFKTRQGLEEFKNEMTSIAKLQHKNLVRLSGFCLEENEKLLGYEYMPNNSLDTFLHGDSGMKAKDLNLWSLNCSTVAVIRMKL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1040 140 SUPERFAMILY Protein kinase-like (PK-like) 43 118 IPR011009 -
Lele45g1040 140 Pfam Protein tyrosine and serine/threonine kinase 48 123 IPR001245 GO:0004672|GO:0006468
Lele45g1040 140 Gene3D Phosphorylase Kinase; domain 1 7 102 - -
Lele45g1040 140 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 40 123 - -
Lele45g1040 140 ProSiteProfiles Protein kinase domain profile. 2 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1040 Lele-ChrLele45 20980740 20982520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1040 44 112 Receptor kinase-like Gene Family AT4G11530 66.667 2.26e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele45g1040 PK_Tyr_Ser-Thr 3.4e-11 CL0016