Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1035 ATGGGTAGCTTCAAATGCCTTATACTTGTTTTCATGTTTCCAATGCTCACGCTTATCTTTGGTGCTGATGATGACAAATTTTTCTCCTTGTCCTGCACATATTTTACTGCCGACAAATTGTATGAAGCTAATCTGAAAGCCCTCCTCTCCTATCTCAAGTCCAATGCAACCCAAGACAATGGCTTTTACAGTACAGTTGCAGGCTGGGGAACCGCAAATTCTATCAGAGGACAAATTCTTTGCCGTGGCGATGTCACTCCCTCCACATGTCAACGCTGTGTCACACTCGCAGCAGAAGAAACATTACGCTCTTGCCCTAACGGAACAGATTTCATAATTTACTACGATCTGTGCATGCTGCAGTATACAAACAAATCCTTCCATCTTGATAGCTTACTCCCTGACGGTTCCAGTTGGTCTTTAAACGACACGGAAATCTCTGACCTGAGCCGTTTGAATCAAACAGTATGGGTTCTTTTAAGAAATGTGACCGCAAAAGCTGCGAATTCAAACTTGCCTGATAAGAAATTTGCCACCGACGAAGTACCAGTTACGGCCACCCAGAAGCTGTACGGATTAGCACAGTGCAGGCCGGATTTGACGGCTTCTGAATGTAGCAAGTGTTTTCAAACGGCCTTCCGACTGCTTGAGGAGTGTTGCGATGAAGATTCAAGGAAGCATCTGGATTGTTGTACGGAGAGTCCACGCGCATGGGGTGTTGTCGCCGGATGTAACGTTAGATATGATACTCACCGTTTTTATAATGTAAGCAAGGTCTCAAATGAACCAGACGTTCAAGTTCATCCCACGCCTTCAGGAAAACGACATACTGGATCGCCAAATATTGTTGTGATTGTTGCAGCCATTATCGTTTCAGCAACGCTTTTTTGTTTGAGCTGCTATTTGCTAAGGACAAAACTAAGGAAGAGCCAGCAAGCTATTCTTACAGAAAACTTTGGCGAAGAAAGTTCAAAGATAAAGTCCTTGCGATTTAATCTGACTACAATTGAAGCTGCAACAAATAAGTTTTCTACCCAGAATAGCATTGGCAAAGGTGGATTTGGAGATGTATACAAGGGAATTCTTCATGATGGCCAAGAGATTGCTGTGAAAAGACTCTCAAAAAGTTCTGTACAAGGAGCATTAGAATTTAAGAATGAAGTTTTGCTGATAGCCAAACTTCAACACAGAAATCTAGTAACCTTGGTGGGGTTTTGCTTGGAAGAACGAGAGAAAATTCTTGTATATGAATATGTTCCTAATAAGAGTATTGATTTCTTTTTATTTGATTCTGAAAACCAAAGACAATTAAGTTGGCTTGAACGATTCAAAATCATCAGTGGAATTGCTCGAGGGCTTCTTTACTTACATGAACATTCTCGCCTCAAAATTATTCATCGTGATCTTAAACCTAGTAATATTTTATTAGATAGCAAAATGAATCCAAAAATATCGGATTTTGGTATGGCAAGAATGGTTGCAATAGATCAAGATCAAGAAAATACAAATAGAATTGTTGGAACGCATGGTTATATGTCTCCAGAATATATAATTTACGGACAATTTTCAGAGAAATCAGATGTATTTAGTTTTGGAGTTATAATCTTAGAAATAATTAGCAGCAAAAGGAATGCTAGATCTTATGAATCACACCTCTTGACTCATGCCTGGAAGCAATGGAATGAGGGAACAGCACTACAAGTGTTGGACTCGTGTCTAAGGGAATGTTGTTGTCAAAGTGAAGTAATAAGATGTGTTCAGATTGGGTTATTATGTGTTCAAGAAAATCAAGAAGAGAGGCCAACAATGACTCAAGTTGTTTCATATCTGAGTAATCCTTCCATTGAATTGCAATCTCCGAGAGAACCCGCATTCTTCATGCATACCAGAGAGAATCCAACTGAAAATACTGCAACTGAATCACTTACGGATCAATATTTTGTGAATGCAAATCCATTCTCTTTGAATGAAATGTCTAAGACTGAACTCTTCCCACGATGA 2001 0.3958 MGSFKCLILVFMFPMLTLIFGADDDKFFSLSCTYFTADKLYEANLKALLSYLKSNATQDNGFYSTVAGWGTANSIRGQILCRGDVTPSTCQRCVTLAAEETLRSCPNGTDFIIYYDLCMLQYTNKSFHLDSLLPDGSSWSLNDTEISDLSRLNQTVWVLLRNVTAKAANSNLPDKKFATDEVPVTATQKLYGLAQCRPDLTASECSKCFQTAFRLLEECCDEDSRKHLDCCTESPRAWGVVAGCNVRYDTHRFYNVSKVSNEPDVQVHPTPSGKRHTGSPNIVVIVAAIIVSATLFCLSCYLLRTKLRKSQQAILTENFGEESSKIKSLRFNLTTIEAATNKFSTQNSIGKGGFGDVYKGILHDGQEIAVKRLSKSSVQGALEFKNEVLLIAKLQHRNLVTLVGFCLEEREKILVYEYVPNKSIDFFLFDSENQRQLSWLERFKIISGIARGLLYLHEHSRLKIIHRDLKPSNILLDSKMNPKISDFGMARMVAIDQDQENTNRIVGTHGYMSPEYIIYGQFSEKSDVFSFGVIILEIISSKRNARSYESHLLTHAWKQWNEGTALQVLDSCLRECCCQSEVIRCVQIGLLCVQENQEERPTMTQVVSYLSNPSIELQSPREPAFFMHTRENPTENTATESLTDQYFVNANPFSLNEMSKTELFPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1035 666 SMART serkin_6 343 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1035 666 CDD STKc_IRAK 349 610 - -
Lele45g1035 666 FunFam cysteine-rich receptor-like protein kinase 10 419 617 - -
Lele45g1035 666 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Lele45g1035 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 662 - -
Lele45g1035 666 ProSiteProfiles Gnk2-homologous domain profile. 134 253 IPR002902 -
Lele45g1035 666 Pfam Protein tyrosine and serine/threonine kinase 345 610 IPR001245 GO:0004672|GO:0006468
Lele45g1035 666 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lele45g1035 666 Gene3D - 27 127 IPR038408 -
Lele45g1035 666 Gene3D - 137 253 IPR038408 -
Lele45g1035 666 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Lele45g1035 666 SUPERFAMILY Protein kinase-like (PK-like) 327 636 IPR011009 -
Lele45g1035 666 Pfam Salt stress response/antifungal 151 250 IPR002902 -
Lele45g1035 666 Pfam Salt stress response/antifungal 34 124 IPR002902 -
Lele45g1035 666 ProSiteProfiles Protein kinase domain profile. 343 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1035 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 304 418 - -
Lele45g1035 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lele45g1035 666 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1035 Lele-ChrLele45 20947901 20950618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1035 7 666 Receptor kinase-like Gene Family AT4G05200 41.860 8.74e-176 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele45g1035 Pkinase 8.2e-49 CL0016