Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1034 ATGATTGCTTTCGTCGTATTCATCTCCATCTTCATCTTCAGCGCCACCCGAGCAGCCGCCTCTGTATTCAACGATGTCAACTGCACAACCAACATCACCTTCACTCCTAACGGCACCTTCCAAAGCAACCTCGCCACCCTCCTCTACTCCCTCTCTTCCAACGCCACAGGCGGCACCAGATTCTACAACACCACCATCCGCCGCGGCGGGGACGAAAACACTGTATACGGCCTCTTCATGTGCCGTGGCGATGTGCCGTATCCACTGTGCAGTGAGTGCGTTAACTTCGCCACCCAAAGGATAAGCTCATCGTGTCCTTCAGCCAAAGAAGCCATAATCTGGTACAACGAGTGCTTGCTCCGATATTCCTATAGGCTTATCTTCTCTTCCATGGAAGAATGGCCAAGATACCAGATCAAGATTCCGTTAGGCGACCCTGTACTTTTACGAACTCATCGCTTTTACAATACGTTGGGATCGATTTTGAATGATCTGATAGATGGAGCAGCTCAGGCTCTTGGGAAATCTGATTCCAAGTTCGGTGTTCAGCAAGGTGACGCATCTGGAAACACGACGTTGTACGGCCTGGCTCAGTGCACGCCGGACTTAGCCGCCGGCGACTGCAAGCGGTGTGTCAGGGACGCGATAGGGGAGATTACGACGTCGTGTTGCGGAGGTAGCATCGGGCAAAGTGTAATGTTCCCCAGTTGCTTTGTTCGCTACGAAACGTATCCATTTTATCAGCATTCCGGCCCGTCGACATCCTCGCCGACGGCAGCTAACGGAATAAGCAATAAATTGCGAACAGAAATTATCGCAATTATTGTCCCCTCGATTATTGTTCTGATGGCGGCAGTAATGGTTTTGTGCTACTACATGGTACCAAAAAATTCAAATTCAAAGAAGAAATCGCAAAGGGCCACTGATCTCTCAGAAAACTTTGGGGTTGAAATTATTACCACAATGGATTCGTTGCAAATTGACATGGCTACAATTAAAGTAGCTACGAACAACTTTTCTGAAGGAAGTTGGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGGGAGTTCTTCTTGATGGACAAGAGATAGCTGTGAAGAGATTGTCAAGAACTTCTACGCAGGGAATTGAAGAATTTAAGAACGAGGTTTTGCTAATAGCTAAACTTCAACATAGAAATTTAGTGAGGCTACTTGGATTCTGCCTTGAAGATGATGAGAAGATACTTATTTATGAATATGTGCCTAACAAAAGCCTTAATCACTTCCTATTTGATTTCGGCATGGCAAGACTAATAACACTGGACCAGATTGAAGGAAGCACAAGTAGGATTGTTGGAACATATGGATATATGTCTCCAGAATATGCAATGCATGGATACTTCTCTATAAAGTCCGATGTCTTTAGTTTTGGAGTCATGATGCTCGAGATTATCAGCGGAAGAAAGAATTCTTGTTCTTATGAATCATGTCGCATCGATGATCTCCTGAGTGACGCTTGGAGAAAATGGAGGAATGAATCAATAGAAGAATTGCTGGATCCAGCAGTGAAAGAATCGTATTCAGAACAAGAAGTGTTGAGGTGTATTCAGATTGGTTTATTGTGTGTTCAAGAAAATCCAGATGATAGGCCTACAATGGGAAACGTAGCTTTATATCTGAGCAACGTTACGGTTGAATTGCCATATCCTCTACAGCCTGCATTTTTCATGCAAGGAAGAAGAAGACGAAACCATAATGTTGAACATGATCCCAATTTTGATCAATCCACCAACTTCTCTGTCTCGTCCTCCATTAATGAGATGTCTATAAGTAAATTTTTCCCTCGATAA 1833 0.4414 MIAFVVFISIFIFSATRAAASVFNDVNCTTNITFTPNGTFQSNLATLLYSLSSNATGGTRFYNTTIRRGGDENTVYGLFMCRGDVPYPLCSECVNFATQRISSSCPSAKEAIIWYNECLLRYSYRLIFSSMEEWPRYQIKIPLGDPVLLRTHRFYNTLGSILNDLIDGAAQALGKSDSKFGVQQGDASGNTTLYGLAQCTPDLAAGDCKRCVRDAIGEITTSCCGGSIGQSVMFPSCFVRYETYPFYQHSGPSTSSPTAANGISNKLRTEIIAIIVPSIIVLMAAVMVLCYYMVPKNSNSKKKSQRATDLSENFGVEIITTMDSLQIDMATIKVATNNFSEGSWIGKGGFGEVYKGVLLDGQEIAVKRLSRTSTQGIEEFKNEVLLIAKLQHRNLVRLLGFCLEDDEKILIYEYVPNKSLNHFLFDFGMARLITLDQIEGSTSRIVGTYGYMSPEYAMHGYFSIKSDVFSFGVMMLEIISGRKNSCSYESCRIDDLLSDAWRKWRNESIEELLDPAVKESYSEQEVLRCIQIGLLCVQENPDDRPTMGNVALYLSNVTVELPYPLQPAFFMQGRRRRNHNVEHDPNFDQSTNFSVSSSINEMSISKFFPR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1034 610 ProSiteProfiles Gnk2-homologous domain profile. 22 127 IPR002902 -
Lele45g1034 610 Gene3D Phosphorylase Kinase; domain 1 297 409 - -
Lele45g1034 610 ProSiteProfiles Gnk2-homologous domain profile. 136 246 IPR002902 -
Lele45g1034 610 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 414 - -
Lele45g1034 610 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lele45g1034 610 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 433 559 - -
Lele45g1034 610 Pfam Protein tyrosine and serine/threonine kinase 426 551 IPR001245 GO:0004672|GO:0006468
Lele45g1034 610 Pfam Protein tyrosine and serine/threonine kinase 343 424 IPR001245 GO:0004672|GO:0006468
Lele45g1034 610 Gene3D - 149 246 IPR038408 -
Lele45g1034 610 Gene3D - 21 125 IPR038408 -
Lele45g1034 610 Gene3D Transferase(Phosphotransferase) domain 1 410 560 - -
Lele45g1034 610 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Lele45g1034 610 Pfam Salt stress response/antifungal 152 244 IPR002902 -
Lele45g1034 610 SUPERFAMILY Protein kinase-like (PK-like) 326 583 IPR011009 -
Lele45g1034 610 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 426 - -
Lele45g1034 610 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 21 126 - -
Lele45g1034 610 ProSiteProfiles Protein kinase domain profile. 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1034 Lele-ChrLele45 20938072 20941368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1034 4 610 Receptor kinase-like Gene Family AT4G05200 37.482 1.77e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele45g1034 PK_Tyr_Ser-Thr 1.3e-12 CL0016