Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1031 ATGAGTGGAAATGAAAACTGGTCCCTGAGGTTTAGTATGTTGCACAACATGCAAATCTGTAGAACATACTTTGTGGAAGAAAGCTCCACACTGAAGAACTTGCAATTTAGCTATGCTATAATTGAAGCTGCAACAAACAGGTTTTCTGAAGAGAACAGAATAGGAAAAGGTGGATTTGGACAAGTTTACAAGGGCATTCTTATTGATGGACGAGAAATTGCTGTAAAGAGACTCTCAAGAAATTCTACACAAGGAACATCAGAATTCAAGAATGAAATTTTATCGATTGCCAAACTTCAGCACAAAAATTTAGTGACTTTATTGGGATTTTGCTTGGAAGAACAAGAAAGAATACTTATTTATGAATACGTGCCTAACAAGAGCCTTGATTTCTTTTTATTTGATTCTGAAAAACGGAGATTACTAAATTGGGCTGAGCATTTAAATATCATAAGAGGAATTGCACAAGGACTTTCTTACATGCACGAACATTCTCGCCTCAAGGTTATTCATTGTGATCTCAAACCAAGTAATGTTTTATTAGATGGCAAGATGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATAATTTCAATAGATGCAGACCAAGTAAATACAAACAAAATTGTTGGGACATTTGGTTACATGGCTCTTTAA 660 0.3455 MSGNENWSLRFSMLHNMQICRTYFVEESSTLKNLQFSYAIIEAATNRFSEENRIGKGGFGQVYKGILIDGREIAVKRLSRNSTQGTSEFKNEILSIAKLQHKNLVTLLGFCLEEQERILIYEYVPNKSLDFFLFDSEKRRLLNWAEHLNIIRGIAQGLSYMHEHSRLKVIHCDLKPSNVLLDGKMNPKISDFGMARIISIDADQVNTNKIVGTFGYMAL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1031 219 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele45g1031 219 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 30 218 - -
Lele45g1031 219 Pfam Protein kinase domain 49 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1031 219 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 124 215 - -
Lele45g1031 219 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Lele45g1031 219 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 14 123 - -
Lele45g1031 219 SMART serkin_6 48 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1031 219 SUPERFAMILY Protein kinase-like (PK-like) 27 218 IPR011009 -
Lele45g1031 219 Gene3D Phosphorylase Kinase; domain 1 11 123 - -
Lele45g1031 219 Gene3D Transferase(Phosphotransferase) domain 1 124 219 - -
Lele45g1031 219 ProSiteProfiles Protein kinase domain profile. 48 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1031 Lele-ChrLele45 20927255 20929166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1031 29 218 Receptor kinase-like Gene Family AT4G05200 61.579 1.67e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele45g1031 Pkinase 4.2e-38 CL0016