Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1029 ATGCACGGCGACCACAACACCCACATACCCATCCACTACCACCAAACCCCCACCGACCAATCCAAACCCCTTCGCCGCCGCCACACCGCCCGCTACTACGTGCAGCGCGTCCAAGACAGCCTCACCACGCGCGTCTCCAAAGTCTTTTGCAGTATCTTCTTAAGCCTTCTTGCCATTGTAGGTCTCATCGCCTTCATCTTATGGCTAAGCCTACGCCCCCACCGACCCAGATTCTTTATCCACGACTTCTCTATTCCGGGTCTGGGCCAAGAATCAGGGTTCCAGAACGCCGAGATCAAGTTCTTCGTCACGGCCCGGAACTCCAACCAGCATATAGTCATTAACTACGAGGCCATGGACGGGACGGTGTATTACAGGGATCAGAATATCGGAAAGACGCCGTTGCTGTTCCCGTTTTCTCAGGAGCCGAAGAACACGACGGAGGTGCACGGCGTTTTGAGCGGAGCAACGTTAACGGTGAGTAGCCAGCGTTGGGCGGAGTTCCTGAACGATAGGGCTCTGGGTAGTGTGGTGTTCCGCGTGGAATTGACGTCCACGATTAGGTTTAAAGTGAACCGTTGGGAAAGTAAGAGTCATAGGATGCACGCAAATTGTGATGTGGGTGTGGGCCCCGACGGGGGCATATTGAGTACGTACAAAGATAAGAGATGTCCCGTTGCTCTCTTGGCCATTGGCGATGTTCTGACAAACCTAGTATTGAAACAATGGGCGTTTTCTATATCATTGAGCTATGATTGGAGTAACTATACCAAAGGAAGCTCCTTTGAGAACAACCTTAAGAACATCCTCGGTTCTCTATCTTCCAATGCTTCAATTTCCAAATCTTACAATGTCTCTTATGGAACAAACCCAGAAAGAGTCTTTACCCTCTTCATGTGCCTCGACTATGTTTCAAATCAAACATGCCAAGACTGCATAGCCACGGCAACACAAGACATGCTTAAACTCTGTCCCCAATCAGAAGAAGCAGTTGTTTGGGAAGAGCACTGCCAACTTCGATATTCCAACAAGAACTTCCTCGGTAAAGTCGATGTCACAGGAAAATTGGGGTTTGATAATCAAAAGAATATTTCAGATCCCAAGAAGTTTGAGTCTGAGGTTAATGGGTTATTGTATAGTACATCAAGCAAAGCAGGGATGATTGTGGGAATTATAGCAGTGACTGGCTTGGCTATAGCGATTTTAAGTTTCTGCGTTTACTTCCTCAGGAAGAAGAGAACTCAGAAAAGTAAGGGTGGAATAGACGGTCATGTGATTGATCTTCATAGCTTTGGGCAGAGAGGTGAAACAGTGTTCCAAAATCACAAGATATCTGAGGATTTGCCTTATTTTGATCTTGAAACTCTGTGCGTTGCTACCAAAAACTTTTCTGATTCAAATAAGCTCGGTCAAGGAGGCTTTGGCCCTGTTTACAAGGCATGGCATCTATGGAATGATGGAAGTGCACTGGAGTTGATGGATCCTCTAGTACCTGATTCATGTCCTGAAGATCAGTTTCTAGTATACTTGCATGTTGGATTACTATGTGTTCAAGAAGATGCATATGACAGACCAACCATATTTTCAGCCATGTTTTTCTTCATCATTCCCATCTTATTCCTTCACCTTGTCTCAGGTTCAGGCTCTCTCTTCACTTGGTGTCCACCTGAATTCCCAGATTACACACAGAACTCTACATTTCATAACAACCTTAAACTTCTTCTAGGTTCACTTTCCAACAACATTTCAGTTTCAGGTTTCTATAACACATCCATTGGAGAAGACACAGATAAGGTCTATGGACTTGCTCTATGCAGAGGAGACATAAATTCCACAATCTGTAAGAACTGTGTTGAGAAGGCAAGCCAAGATATACTCAACAAATGTAGGAGTCAAGATGCTATAATATGGTATGATCTTTGTCAAGTAAGGTACTCATTTCAGATGTTCATTTCAAGGATGGTTTATACCGGGAAGTTTCCTGATGAAAATAATCAGGCGAAGAATGTTTCATTGGATCCAGCTCGATTCAGCCAGGTTCTGATGTACTTAATGAATAACCTGTCCAATGAGGCTGCATTTGTTCCTTCCCACAACATGTTTGCCTCTGGGGAAATTGAATTTTCCCAGGAAATTACAATTTATGGTCTAGTACAATGCACAAAAGACATCTCTGAAACATTATGCTATAACTGTTTGAATTCTGCATTAGGAGACCTTGGAGCTTGTTGCTCATACCGTGAAAGTGGGACAGTTCTTAGTCGAACTTGCGATGTGAGGTTTGGATTGTCTCAGTTCTTCAATACTTCTTCTCAGTACCTTGTGGTTTATCCAACTTCTAAAGGAGGGAAATTGAAGGCATGGATGCTTGTTCTGATTATATGTGCATCAGTGTTCATATTAGCAGTTCTTACTGGTTTCTGCATTTCCTATTTCCTTAGAAAACAAGCAGGGGAAGACAGAGATGATGAAAAAAGCGAAAAGATGCTACTGCAACAATTGGCGACCCCAAAGAGTGTAACAATTACACAAGATGGAGAATTCATTAGCTCTGAAGAACTTGTGTTCATCAGTTTTGCAGCAATAAAGTTCGCCACCGATGACTTTTCTGATTCAAACAAGCTAGGACAAGGAGGTTTTGGTTCTGTGTACAAGGGTGTTCTTCCAGATGGAAATGAAGTAGCAGTTAAAAGGTTATCAAAGAAGTCTTGGCAAGGCACAGAAGAATTAAAAAATGAAGTCATTTTGATTGCAAAACTTCAGCATAAGAATCTGGTGAAGTTGTTGGGATGTGGCTTTGAAGGAGAAGAGAAGTTTCTCATATATGAATACATGTCCAATCAAAGCCTTGACAAATTTATCTTTGATTCAGAAAAACGTTCTCAGCTTGATTGGAATACATGCTATGGCATTATCATGGGTATAGCTAGAGGATTACTTTATCTTCACGAAGAGTCCAGGCTTAGAATCATTCATAGAGACTTGAAACCAAACAATATATTGCTTGATCATGACATGGTTGCAAAGATATCAGATTTCGGTATAGCAAGAATTTTTTATGAAAATCAAAGTACTGCTAATACTAAAAGAGTCGTGGGAACATATGGATACATAGCTCCAGAATATGCAATGGGAGGCATGTTCTCGGTGAAATCTGATATTTTCAGCTTCGGCGTCATCTTGCTCGAGATCATTGGTGGGAAGAAAAGCAGTGGCTTTTATGCAACTGAACTTGCCTCTAACCTTCTAGCATATGCATGGAAGTTATGGGATGAAGGGAAAGAAATGGAATTTGTGGATCCTCATTTAATGGAAGCAAGTGTTTCTTCAGAAATATTAAGGTGCATGAACATAGGACTGTTATGTGTACAAAAAGACCCAGAAGACAGACCGACCATGTCAGATGTTATGGTTCTGTTAGGAAGTGAATCAATGTCTCTTCCAAAACCAAAACAACCTGCATTTTCTATGGGTAGATCAGTTAAAGTTGATCCATCATTGATGACAACTTCCTCTGTGAATCATATAATGCTCTCTAGTGTTCAGCCTAGATGA 3555 0.4214 MHGDHNTHIPIHYHQTPTDQSKPLRRRHTARYYVQRVQDSLTTRVSKVFCSIFLSLLAIVGLIAFILWLSLRPHRPRFFIHDFSIPGLGQESGFQNAEIKFFVTARNSNQHIVINYEAMDGTVYYRDQNIGKTPLLFPFSQEPKNTTEVHGVLSGATLTVSSQRWAEFLNDRALGSVVFRVELTSTIRFKVNRWESKSHRMHANCDVGVGPDGGILSTYKDKRCPVALLAIGDVLTNLVLKQWAFSISLSYDWSNYTKGSSFENNLKNILGSLSSNASISKSYNVSYGTNPERVFTLFMCLDYVSNQTCQDCIATATQDMLKLCPQSEEAVVWEEHCQLRYSNKNFLGKVDVTGKLGFDNQKNISDPKKFESEVNGLLYSTSSKAGMIVGIIAVTGLAIAILSFCVYFLRKKRTQKSKGGIDGHVIDLHSFGQRGETVFQNHKISEDLPYFDLETLCVATKNFSDSNKLGQGGFGPVYKAWHLWNDGSALELMDPLVPDSCPEDQFLVYLHVGLLCVQEDAYDRPTIFSAMFFFIIPILFLHLVSGSGSLFTWCPPEFPDYTQNSTFHNNLKLLLGSLSNNISVSGFYNTSIGEDTDKVYGLALCRGDINSTICKNCVEKASQDILNKCRSQDAIIWYDLCQVRYSFQMFISRMVYTGKFPDENNQAKNVSLDPARFSQVLMYLMNNLSNEAAFVPSHNMFASGEIEFSQEITIYGLVQCTKDISETLCYNCLNSALGDLGACCSYRESGTVLSRTCDVRFGLSQFFNTSSQYLVVYPTSKGGKLKAWMLVLIICASVFILAVLTGFCISYFLRKQAGEDRDDEKSEKMLLQQLATPKSVTITQDGEFISSEELVFISFAAIKFATDDFSDSNKLGQGGFGSVYKGVLPDGNEVAVKRLSKKSWQGTEELKNEVILIAKLQHKNLVKLLGCGFEGEEKFLIYEYMSNQSLDKFIFDSEKRSQLDWNTCYGIIMGIARGLLYLHEESRLRIIHRDLKPNNILLDHDMVAKISDFGIARIFYENQSTANTKRVVGTYGYIAPEYAMGGMFSVKSDIFSFGVILLEIIGGKKSSGFYATELASNLLAYAWKLWDEGKEMEFVDPHLMEASVSSEILRCMNIGLLCVQKDPEDRPTMSDVMVLLGSESMSLPKPKQPAFSMGRSVKVDPSLMTTSSVNHIMLSSVQPR 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1029 1184 ProSiteProfiles Gnk2-homologous domain profile. 658 766 IPR002902 -
Lele45g1029 1184 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 548 650 - -
Lele45g1029 1184 ProSitePatterns Protein kinases ATP-binding region signature. 875 897 IPR017441 GO:0005524
Lele45g1029 1184 MobiDBLite consensus disorder prediction 1 25 - -
Lele45g1029 1184 Gene3D - 552 650 IPR038408 -
Lele45g1029 1184 Gene3D - 660 766 IPR038408 -
Lele45g1029 1184 Gene3D - 246 346 IPR038408 -
Lele45g1029 1184 SMART serkin_6 869 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1029 1184 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 835 944 - -
Lele45g1029 1184 Pfam Salt stress response/antifungal 673 761 IPR002902 -
Lele45g1029 1184 Pfam Salt stress response/antifungal 560 647 IPR002902 -
Lele45g1029 1184 Pfam Salt stress response/antifungal 254 343 IPR002902 -
Lele45g1029 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 990 1002 IPR008271 GO:0004672|GO:0006468
Lele45g1029 1184 FunFam Uncharacterized protein 945 1146 - -
Lele45g1029 1184 SUPERFAMILY Protein kinase-like (PK-like) 850 1139 IPR011009 -
Lele45g1029 1184 Pfam Late embryogenesis abundant protein 103 205 IPR004864 -
Lele45g1029 1184 ProSiteProfiles Gnk2-homologous domain profile. 244 346 IPR002902 -
Lele45g1029 1184 ProSiteProfiles Gnk2-homologous domain profile. 549 650 IPR002902 -
Lele45g1029 1184 Pfam Protein kinase domain 870 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1029 1184 ProSiteProfiles Protein kinase domain profile. 869 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g1029 1184 SUPERFAMILY Protein kinase-like (PK-like) 446 485 IPR011009 -
Lele45g1029 1184 Gene3D Phosphorylase Kinase; domain 1 428 492 - -
Lele45g1029 1184 Gene3D Phosphorylase Kinase; domain 1 832 944 - -
Lele45g1029 1184 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 260 479 - -
Lele45g1029 1184 Gene3D Transferase(Phosphotransferase) domain 1 945 1149 - -
Lele45g1029 1184 CDD STKc_IRAK 875 1136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1029 Lele-ChrLele45 20891198 20901327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1029 260 493 Receptor kinase-like Gene Family AT4G05200 22.269 3.67e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele45g1029 Pkinase 8.1e-48 CL0016