Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1018 ATGCCTCATACCAATGATAGTCCATATACCTCGAGCCAACAGCCAACTGGTGCATTTTCTGGTCTGATCAATTCACTTATGGAACAAGGTTTGATCTCATTGACTGGACAACCCCCTGCACAGGATTCTGTTGGAACTGAATTTAATCCTGATGTTCTGAAGATCCGGCATGAGTCGGCAATTAGTGCTTTATATTCTGATCTCCCTCGACAATGCACAACTTGTGGTCTTCGATTCAAGAGTCAAGAGGAGCACAGTACTCATATGGATTGGCATATGACTAAGAATCGGATGTCTAAAAATCGTAAGCAGAAGCCTTCTCGTAAGTGGTTTGTGAGTGAGAGAATGTGGCTTAGTGGTGCAGAGGCATTGGGAACAGAAGTGGTACCTGGTTTTTTGCCAACGGAGGCCATGGAGGAAAATAAAGAAGATGAAGAGATGGCTGTGCCAGCTGATGAAGACCAGAATACATGTGCGTTATGTGGAGATCCTTTGGAAGAGTTTTATAGTGATGAAACTGAGGAATGGATGTACAGAGGAGCTGTATACCTAGATGTTCCCAAGGGAACAGTGCCACGCATGGATAGGTCACAGTTAGGTCCAATCGTTCATGCTAAATGCAGATCTGAATCTAGTGCTGTCCCCACCGAAGAATTTAGACAGGATGACGGGGACGCTGATGATGAAGAGGGTAGTCAAAGAAAACGAATGCGGAGTTAA 720 0.4472 MPHTNDSPYTSSQQPTGAFSGLINSLMEQGLISLTGQPPAQDSVGTEFNPDVLKIRHESAISALYSDLPRQCTTCGLRFKSQEEHSTHMDWHMTKNRMSKNRKQKPSRKWFVSERMWLSGAEALGTEVVPGFLPTEAMEENKEDEEMAVPADEDQNTCALCGDPLEEFYSDETEEWMYRGAVYLDVPKGTVPRMDRSQLGPIVHAKCRSESSAVPTEEFRQDDGDADDEEGSQRKRMRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1018 239 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 10 228 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Lele45g1018 239 MobiDBLite consensus disorder prediction 202 239 - -
Lele45g1018 239 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1018 Lele-ChrLele45 20821328 20822948 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1018 10 239 C2H2 Transcription Factor Family AT4G04885 70.435 1.52e-112 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele45g1018 None None None