Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1002 ATGAAAGTAGTTTCCCCCAAGAGACCAGGACAACAAAGCAAGGTGGTCACTGAGATTGTTGGAGAGAAAATGGCCCCAAAAGCTATCTTCTTTTTTGTTCTGCTTTGCTTGTCATCTCTGTCTCTGAGTCCTGTTCTTGCAGAGACTGAGGAACATGAAGATCCTGGCCTTATTATGAACTTCTACAAGGAAACTTGCCCTCAAGCTGAAGATATTATCAAAGAACAAGTCAAACTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCATGGCTCAGAAACATCTTCCATGATTGTGCTGTTCAGAGTTGTGATGCTTCTCTGCTTCTGGATTCCACAAGAAGGACCTTGTCTGAGAAGGAGACAGACAGAAGCTTTGGTTTGAGGAACTTCAGATACATTGAGACCATCAAAGAAGCTGTAGAGAGAGAATGTCCTGGAGTTGTTTCATGTGCTGACATTCTTGTTCTCTCCGCTAGAGATGGAATTGTTGCGCTGGGTGGACCTCATATTCCACTTAAAACGGGAAGAAGAGATGGAAGAAGCAGCAGATCAGATGTGGTTGAACAGTATCTCCCAGATCACAATGAAAGCATCTCTGTTGTTCTTGAGAGGTTCTCTTCCATGGGAATTGACACCCCTGGTGTTGTTGCACTTCTGGGAGCACACAGTGTAGGGAGAACACACTGTGTGAAGCTGGTGCACCGTTTGTACCCAGAGGTAGCAGCAGAATTGAACCCAGACCACGTCCCTCACATGCTGAAGAAGTGCCCGGACGCAATTCCTGACCCGAAGGCGGTGCAATACGTGAGAAACGATCGAGGCACGCCGATGGTTCTAGACAACAACTATTACAGGAACATACTTGACAACAAGGGGTTGTTGATAGTGGATCACCAGCTAGCCTATGACAAGAGAACCAGGCCATTTGTGAAGAAGATGGCCAAAAGCCAGGACTATTTCTTCAAGCACTTCGCCAGAGCCATCACCCTCTTATCCGAAAACAATCCTCTCACCGGCTCGAAGGGCGAGATCAGAAGGCAATGCAATGTTGCCAACAAGCACCACCATGAGGAGCCTTAA 1083 0.4681 MKVVSPKRPGQQSKVVTEIVGEKMAPKAIFFFVLLCLSSLSLSPVLAETEEHEDPGLIMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVALGGPHIPLKTGRRDGRSSRSDVVEQYLPDHNESISVVLERFSSMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVAAELNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLAYDKRTRPFVKKMAKSQDYFFKHFARAITLLSENNPLTGSKGEIRRQCNVANKHHHEEP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1002 360 FunFam Peroxidase 60 201 - -
Lele45g1002 360 Gene3D Peroxidase, domain 2 193 332 - -
Lele45g1002 360 FunFam Peroxidase 193 332 - -
Lele45g1002 360 PRINTS Haem peroxidase superfamily signature 88 102 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Haem peroxidase superfamily signature 167 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 CDD secretory_peroxidase 56 351 IPR033905 GO:0004601|GO:0042744
Lele45g1002 360 SUPERFAMILY Heme-dependent peroxidases 57 353 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 90 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 271 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 327 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 66 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 287 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 Gene3D - 60 353 - -
Lele45g1002 360 ProSiteProfiles Plant heme peroxidase family profile. 56 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 PANTHER - 45 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele45g1002 360 Pfam Peroxidase 74 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1002 Lele-ChrLele45 20662760 20666261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1002 24 356 Peroxidase AT4G21960 80.180 0.0 569