Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g1000 ATGCGGCTATCGGTGACTTTCGCTCAGAGACAAGCCCACCGGGAAAGAAAGCAAGCTATTCCAGGAACCGATCATAAAGCCGCTGCCTTCTGGGAGATCCTCGCCGTCCATCCAATTCTGTGGTTGAATTTCTTAAAGATAAAGATATCATCAAAAACCAGAGAAAAAAGACACCATCTTTACCACCCGAATACAAAACCCACATTCCCTTTTCTTCTTCTTCGGGGAATTCCCATATCGACAACTATGTCTTGCTCCAATCTGACAATGTGGGTTTCTTCGAAACCTTCTTTATCCGATGCTTCTTCCCTCTCCTTCCGTGCATCAATTAACCCCTTTTTGCACGTTCCTTATCAGAACCCATCTCCTTCGCGATCCTCTGCGACGCAAATCCAGTGTGGTCTCCGTGAGCTCAGAGACCGAATTGATTCTGTGAAGAACACCCAGAAAATCACAGAGGCCATGAAGCTCGTCGCCGCCGCGAAAGTCAGAAGAGCTCAAGAAGCTGTCGTTAATGGCAGGCCTTTCTCTGAGACCCTTGTCGAAGTCCTTTACAACATCAACGAGCAGCTCCAAACTGAAGACGTTGACGCTCCTCTCACAAAAGTTCGACCTGTTAAGAAGGTGGCTTTGGTTGTCTGCACTGGAGATCGAGGTCTCTGTGGGGGTTTCAATAACCAAATCATTAAAAAAGCTGAAGCAAGAATCGCCGAATTGAAGAGTCTGGGTCTTGATTATACCGTCATTAGCGTTGGGAAAAAGGGTAATTCGTATTTCATTCGTAGGCCTTATATCCCAGTAGATAGATTTCTCGAGCAAGGAACTCTTCCAACTGCAAAAGAAGCTCAAGCCATTGCTGATGATGTTTTCTCTTTATTTGTAAGTGAAGAGGTTGATAAGGTTGAGTTATTATACACAAAGTTCGTGTCTTTAGTTAAATCCAATCCTGTGATTCATACTCTACTTCCTCTGTCACCAAAAGGAGAGATCTGTGATGTGAATGGTGTCTGTGTGGATGCTGCTGAAGATGAGTTCTTTAGGTTGACTACAAAGGAAGGCAAGTTGACTGTTGAGAGAGATGCTATGAGGACCAAGACAGACGATTTCTCCCCTATTTTGCAGTTTGAGCAGGACCCAGTTCAGATTCTTGATGCCTTATTGCCACTTTACTTGAATTCTCAGATTCTTAGAGCATTGCAGGAGTCACTAGCCAGTGAGCTAGCTGCTAGAATGAGTGCTATGAGCAATGCTACTGATAACGCCATGGAATTGAAGAGGAACTTGTCAAGAGTATACAACAGGGAACGTCAAGCCAAGATCACTGGTGAAATTCTGGAAATCGTTGCTGGTGCCAATGCCCTAGCATAG 1368 0.4474 MRLSVTFAQRQAHRERKQAIPGTDHKAAAFWEILAVHPILWLNFLKIKISSKTREKRHHLYHPNTKPTFPFLLLRGIPISTTMSCSNLTMWVSSKPSLSDASSLSFRASINPFLHVPYQNPSPSRSSATQIQCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDVDAPLTKVRPVKKVALVVCTGDRGLCGGFNNQIIKKAEARIAELKSLGLDYTVISVGKKGNSYFIRRPYIPVDRFLEQGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPVIHTLLPLSPKGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDAMRTKTDDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAMELKRNLSRVYNRERQAKITGEILEIVAGANALA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g1000 455 Gene3D ATP synthase, gamma subunit, helix hairpin domain 350 454 - -
Lele45g1000 455 Gene3D - 201 325 - -
Lele45g1000 455 PANTHER ATP SYNTHASE GAMMA CHAIN 82 454 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 Pfam ATP synthase 135 454 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 Gene3D ATP synthase, gamma subunit, helix hairpin domain 134 200 - -
Lele45g1000 455 FunFam ATP synthase gamma chain, chloroplastic 202 325 - -
Lele45g1000 455 FunFam ATP synthase gamma chain, chloroplastic 351 454 - -
Lele45g1000 455 Hamap ATP synthase gamma chain [atpG]. 132 454 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 ProSitePatterns ATP synthase gamma subunit signature. 440 453 IPR023632 -
Lele45g1000 455 Coils Coil 414 434 - -
Lele45g1000 455 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 134 454 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 134 454 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 CDD F1-ATPase_gamma 135 451 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 FunFam ATP synthase gamma chain, chloroplastic 133 200 - -
Lele45g1000 455 PRINTS ATP synthase gamma subunit signature 432 453 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 PRINTS ATP synthase gamma subunit signature 299 316 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 PRINTS ATP synthase gamma subunit signature 401 420 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lele45g1000 455 PRINTS ATP synthase gamma subunit signature 206 225 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g1000 Lele-ChrLele45 20640695 20644019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g1000 106 454 Primary Pumps ATPases AT1G15700 69.944 6.44e-180 506