Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0995 ATGGTTTGCAAGAACCTCGCCTATGAGTTCAGCATCCATCATAGTTATATATATATAATATGGCTTGCATCAACATTGACACTTATACATGGAGCATCAAAGGAAGTAGCTTCAAACCCCGAAGTTGTGAATATTGGAGCCATTTTCACATTTAAAACTATAAATGGACGAGTTGCTAAAATTGCTATTGAAGCTGCAGAGAAAGATGTGACTTCCGATCCACGCATCCTTGGTGGACGCAAATTGTCCATAACCCTGCATTATTCTAACTTCAATGTTTTCTTGGCTTCATCGGAGTTCTTGGAGAGGGACTCAGTTGCTATTATTGGTCCACAGAGTTCAGTTATGGCCCCTGTGATCTCGCATTTGGAAAATGAACTCCATGTTCAGCTTCTGTCATTTACAACTCCGGATCCCACCCTGTCACCTCTGCAGTACCCTTATTTTCTGCAAACAGCACCCAATGATCAATTCCAGATGACTGCAGTGGCAGACATGATTAGATATTTTGATAAACTTGCTGAAAAGCGCTGTAAGATATCTTACAAAGCACCACTTCCCCCTGATCCAACTGCTAGTCGGAATGATATTACTATTCAATTGACCAAGGTTCAAAGTATGGAGTCCAGAGTGATTGTTCTTCACACCTTCTCCAAGACAGGTCTTTTGGTTTTTGATGTGGCTCAGGAATTAGGAACGATGAGTGAAGGTTATGTCTGGATAGCTTCTTCTAGGTGGAACCAGATTAGTAATGGTTCAATTGGGTTGAATCCATATGGACTCTATGCTTATGATTCTGTTTGGATCATTGCCCTTGCATTGAAATCATTTTTTGATCAGAATGGACCCATTCAATTTGGTTCAGATAGATCCCCCTTAAATCCATCCTATGACATCCTCAATGTAATTAATGGTAGTTATAGGAAAATCGGGTACTGGTCTAATTATTCTGGCCTGTCTGTTATTCCTCCCGAGAAACTTCACACTAAGCGAGCCAACCAATCAATTTTAAACCAACACATGTCCAATAAAGTTCAGGGATACTGCATAGATGTCTTCCTGGCTGCCTTAAATCGCTGCCATATGCAGTTCCTTACAATTACATTTACAGGACTTGTTGTGGTTACAAAAGTAAAACAATTAAAGTCAAGTGATTGGGCTTTCTTGCGACCTTTTACTCCATTAATGTGGGGTGTCACAGCTGTTTTCTTCCTCGTTGTTGGAGCAGTTGTGAGGATTCCTGAACATAGAACAAATTACGAGTTCCCGGAGCCTCCTAGGAAACAAATTGTTACAATTCTCTGGTTTAGCCTCTCCGCCATGTTCTTTGCACACAGAGAGAACACAGTTAGTGCACTTGGTCGTATTGTACTAATCAGCTGGCTTTTTGTGGTTTTGGTATTCAATTCAAGCTATACTGCAAGCCTAACATCAATTCTCACTGTGCAACAACTTTCCTCTCCAATAACAGGAATTGATACCTTGATAACCAGTAATGAACGTATAGGATTTCAAGTAGGATCATTTGCTGAAAAGTATCTTACTCAAGAACTCAACGCCCCAAAATATAGACTTATTCCTCTCGGTTCACCGGAAGAATATGCTATCGCTCTCGAGAGGGGAACCGTCGCGGCTGTCGTTGATGAACGACATATGTAG 1659 0.4099 MVCKNLAYEFSIHHSYIYIIWLASTLTLIHGASKEVASNPEVVNIGAIFTFKTINGRVAKIAIEAAEKDVTSDPRILGGRKLSITLHYSNFNVFLASSEFLERDSVAIIGPQSSVMAPVISHLENELHVQLLSFTTPDPTLSPLQYPYFLQTAPNDQFQMTAVADMIRYFDKLAEKRCKISYKAPLPPDPTASRNDITIQLTKVQSMESRVIVLHTFSKTGLLVFDVAQELGTMSEGYVWIASSRWNQISNGSIGLNPYGLYAYDSVWIIALALKSFFDQNGPIQFGSDRSPLNPSYDILNVINGSYRKIGYWSNYSGLSVIPPEKLHTKRANQSILNQHMSNKVQGYCIDVFLAALNRCHMQFLTITFTGLVVVTKVKQLKSSDWAFLRPFTPLMWGVTAVFFLVVGAVVRIPEHRTNYEFPEPPRKQIVTILWFSLSAMFFAHRENTVSALGRIVLISWLFVVLVFNSSYTASLTSILTVQQLSSPITGIDTLITSNERIGFQVGSFAEKYLTQELNAPKYRLIPLGSPEEYAIALERGTVAAVVDERHM 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0995 552 Pfam Ligand-gated ion channel 396 498 IPR001320 GO:0015276|GO:0016020
Lele45g0995 552 Gene3D - 32 302 - -
Lele45g0995 552 Pfam Receptor family ligand binding region 61 170 IPR001828 -
Lele45g0995 552 Pfam Receptor family ligand binding region 172 248 IPR001828 -
Lele45g0995 552 FunFam Glutamate receptor 385 515 - -
Lele45g0995 552 SUPERFAMILY Periplasmic binding protein-like II 342 550 - -
Lele45g0995 552 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 367 551 - -
Lele45g0995 552 Gene3D - 381 519 - -
Lele45g0995 552 SUPERFAMILY Periplasmic binding protein-like I 38 324 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0995 Lele-ChrLele45 20583598 20586801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0995 18 550 Ion Channels AT4G35290 44.205 0.0 555