Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0972 ATGCTTCCTGGTTTGGGATTCCCCGTGAATCTTGGCCGCGTAATGGAATCTTCTGATATTAATAATAATAATCGGAAGGTCCTCAGTGAAGTTGATTTCTTCTCTAACGCAATAAGCAAGTCGTCGTCTTCATCAGCAGCAGCACCACCAGCTCGTGAAATTCATCATCATCAAGATGTTAAAACCCTTACCAATATCTCTGTCAAGAAGGAAATTCCTCAAACTCAACCAGTTTCTAGGTCTAATTTGGATATGAATATTGGTTTACAACTGCATACTAGTCATAATACCAGGAGTGATCAGTCTACGGTGGATGATCATGGCGTGTCGTCAGATGCAGATGACAAGCGAGCCCAGAGCAACGAGTTGAAACAACTGCAAGAAGAGGTTCAGCGAATGAACACAGAAAACCAGAATCTGAAAGAGATGCTGAGTCACATGAGCAATAACTACACCGCCTTGCAAATGCATCTCGCTGCATTGATCCAACAACGACGACACAATAACCAACACGACCATAATCAGGTTGTCGGAAAAGGAGGTGAGGAGAAAAAACAGGTGGCGGCGAGGCAGTTTCTTGAGCTTGGAGAGGGTAGCTGCGGTGAAGCAGCAGAAGCTGATGATGACGATGTGTCGAATTCTAGTTCAGATGAAAGAACTCAATCTGCTTCACCTCAGAACAACAACAATAATGGTAAAAGTAGTGAGATAATGGGTAGGGAAGAGAGTCCTGACTCAGAATCAAAGAAAGCTTATAAGCTCCAGAAACTCAACCCTTCTTCAAATTCCATGGATCAATCCACCACTACTACCACAGAAGCCACCATGAGAAAAGCTCGTGTCTCAGTTCGTGCTAGATCAGAAGCTTCCATGATCAGTGATGGTTGTCAATGGCGAAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGCGCTTACTACAGATGCACCATGGCTGTTGAAGACAGAAGCATATTGGTAACAACGTACGAAGGAAATCATAACCATCCATTGCCTCCGGCAGCTATGGCGATGGCTTCAACGACAAGTGCCGCGGCAGGCATGTTACTGTCTGGTTCAATGTCAAGTCCAGAAGGGTTGATGAAGATGAACCCTAATATGTTAGCAAGAACCATTCTTAACCCTACTAGTTCTCCAACCATGGCTACTCTTTCTGCTTCAGCTCCTTTCCCTACCGTCACATTGGACCTAACTCACAACGGAATGCAGTTTCAACGCCCTAATGCGACACCGTTTCAGCTGGTTCAACCATTGTATAACCAGTCCATGTTTTCTGGCCTTCACTTGTCACAGGATAGGCCAATTGATCAGCAGTCTTCCCCAGCAGCAGCTGACACTGTCGGTAAAGCCGCTGAGGCGATCACCGCCGACCCGAACTTCACGGTGGCTCTCGCTGCTGCTATCTCTTCCATCATCCGTGGTAATAATCATCAGAACAACAACGGTGGCGGCGGCAGTAGCAGTAATCCACATATCCTCAACAGCACTTCAATCAGCAGCTTTTCAGGGAATTAA 1542 0.4572 MLPGLGFPVNLGRVMESSDINNNNRKVLSEVDFFSNAISKSSSSSAAAPPAREIHHHQDVKTLTNISVKKEIPQTQPVSRSNLDMNIGLQLHTSHNTRSDQSTVDDHGVSSDADDKRAQSNELKQLQEEVQRMNTENQNLKEMLSHMSNNYTALQMHLAALIQQRRHNNQHDHNQVVGKGGEEKKQVAARQFLELGEGSCGEAAEADDDDVSNSSSDERTQSASPQNNNNNGKSSEIMGREESPDSESKKAYKLQKLNPSSNSMDQSTTTTTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVEDRSILVTTYEGNHNHPLPPAAMAMASTTSAAAGMLLSGSMSSPEGLMKMNPNMLARTILNPTSSPTMATLSASAPFPTVTLDLTHNGMQFQRPNATPFQLVQPLYNQSMFSGLHLSQDRPIDQQSSPAAADTVGKAAEAITADPNFTVALAAAISSIIRGNNHQNNNGGGGSSSNPHILNSTSISSFSGN 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0972 513 MobiDBLite consensus disorder prediction 99 119 - -
Lele45g0972 513 MobiDBLite consensus disorder prediction 487 513 - -
Lele45g0972 513 SUPERFAMILY WRKY DNA-binding domain 285 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele45g0972 513 MobiDBLite consensus disorder prediction 216 237 - -
Lele45g0972 513 MobiDBLite consensus disorder prediction 94 119 - -
Lele45g0972 513 Coils Coil 109 150 - -
Lele45g0972 513 Pfam WRKY DNA -binding domain 294 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele45g0972 513 SMART WRKY_cls 292 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele45g0972 513 MobiDBLite consensus disorder prediction 200 276 - -
Lele45g0972 513 ProSiteProfiles WRKY domain profile. 287 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele45g0972 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 86 491 IPR044810 GO:0003700
Lele45g0972 513 MobiDBLite consensus disorder prediction 253 276 - -
Lele45g0972 513 MobiDBLite consensus disorder prediction 238 252 - -
Lele45g0972 513 Gene3D WRKY domain 277 342 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0972 Lele-ChrLele45 20424760 20427045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0972 7 491 WRKY Transcription Factor Family AT1G62300 48.059 4.72e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele45g0972 WRKY 4.6e-12 CL0274