Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0965 ATGGGGGCCACTCGTGTGGCTTCTTCTCTGTTTCTGCCAATCGCTTTGATCTTTGCTGCTCTTCATCTTGCTTTAGCAAACACTGACGCTACTGATGTTCAAGCGCTTGAGGTTTTGTACAACGCCTTAAACAGCCCTTCTTGGCTTACTGGTTGGAAAATTGGTGGTGGTGATCCTTGTGGAGAGTCTTGGAAAGGGATAACATGTGAGGGCTCAGCTGTTGTTTCCATGTATGAGATGATATTGCACAACTGTTTGGGACTCAATGGCACTCTGGGATACCTGCTTTCGGACCTTATGTCACTGAGACAACTGAACCTTGCAAGAAATAACTTGAGCGGAAATCTTCCTTATTCCATTTCTGCCATGACTTACCTCAATTATCTGGATCTATCGTTCAATGACTTTTCTGGAGATCTTCCTCCCTCATTCGGTTCATTGTCCAATCTTTCTTCTGCCTTTTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGTTCTTGTTAGTTTGCCTTTAGATACTTTATCTGATGGGAACTCCTTTGACAATGGCCCTGCTCCTCCTCCTCCTCCTCCACATACAGCCGCCTCTCCCAGAAGATCTCCAAGTGGCCATCACCATTCTGGATCTGGTTCTCATAAAGCACGTGCTTCTAAATCTGACAACGAAGATGCCGATAGCCATAAGGGCTTATCATCTGGGGCTGTTATAGGCATTATTTTGGGTTCAGTTTTTCTAGCCGTTGTTGCACTACTTGCTCTTGTTTTATGTATCCAAAAGTATAAAAGGAAGGTAAAAGGCGCAAGAACTTCCAATGGGAATCCTCCTCTTGGAACCAATAATGTAATTCCTCCGATGCAAGAACAGATGGTGAGAAGTGCTGCTGCTGCTGTTACAGATCTGAAGCCTCCTCCTGCTGAAAAAGTGATAGCTGAGAGGGTTCCTTCAAAGAACGGATCTACTAGGCGGATAAAATCCCCTATAACTGCTACATCATACACAATTGCTACTCTCCAAAGTGCAACAAATAGCTTCAGTCAAGAATTTATTGTTGAAGGTTCGCTTGGTCGAGTTTACAGGGCTGAATTCCCTAATGGGAAGATCATGGCCATTAAGAAGATCGACAATGCGGCACTGTCATTACAGGAAGAAGACAACTTTCTTGAAGCCGTATCAAATATGTCACGCTTGCGGCATCCGAACATTGTTACTCTAGCTGGATACTGCGTGGAGCATGGGCAGCGTCTTCTAGTTTATGAGTATATTGATAATGGAAATCTGCATGATATGCTCCATTTCGCTGAAGATAACAGCAAGGCTTTATCTTGGAATGCTCGAGTTCGAATAGCACTTGGCACTGCCCGAGCTTTAGAGTACTTGCATGAAGTATGCTTGCCTTCTGTTGTACATAGAAACTTCAAATCGGCAAACATATTACTCGACGAGGAGTTGAATCCCCACCTGTCTGATTGTGGTTTAGCTGCTTTAACGCTAAACACCGAACGGCAGGTTTCAACTCAGATGGTTGGCTCATTTGGTTATAGTGCTCCTGATTCACGAGCCAGATCGGAGCAATCACTTGTGAGGTGGGCTACTCCCCAACTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTACCCTGCGAAGTCACTGTCGCGCTTTGCCGATATCATTGCCCTGTGTGTTCAGCCGGAGCCTGAATTTCGACCTCCCATGTCTGAGGTTGTGCAAGCATTGGTCCGGCTAGTGCAAAGAGCGAGTGTGGTGAAACGCCGCCCCAGTGACGAATCTGGGTTCGGTTACAAAACCCCAGATCATGAAGCCTATGACATGTCAGTTTAA 1863 0.4536 MGATRVASSLFLPIALIFAALHLALANTDATDVQALEVLYNALNSPSWLTGWKIGGGDPCGESWKGITCEGSAVVSMYEMILHNCLGLNGTLGYLLSDLMSLRQLNLARNNLSGNLPYSISAMTYLNYLDLSFNDFSGDLPPSFGSLSNLSSAFLQNNQLTGSLSVLVSLPLDTLSDGNSFDNGPAPPPPPPHTAASPRRSPSGHHHSGSGSHKARASKSDNEDADSHKGLSSGAVIGIILGSVFLAVVALLALVLCIQKYKRKVKGARTSNGNPPLGTNNVIPPMQEQMVRSAAAAVTDLKPPPAEKVIAERVPSKNGSTRRIKSPITATSYTIATLQSATNSFSQEFIVEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCVEHGQRLLVYEYIDNGNLHDMLHFAEDNSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTLNTERQVSTQMVGSFGYSAPDSRARSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGYKTPDHEAYDMSV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0965 620 SUPERFAMILY Protein kinase-like (PK-like) 326 586 IPR011009 -
Lele45g0965 620 MobiDBLite consensus disorder prediction 600 620 - -
Lele45g0965 620 FunFam Leucine-rich repeat receptor-like kinase 31 144 - -
Lele45g0965 620 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 43 165 - -
Lele45g0965 620 MobiDBLite consensus disorder prediction 178 229 - -
Lele45g0965 620 SUPERFAMILY L domain-like 30 167 - -
Lele45g0965 620 MobiDBLite consensus disorder prediction 214 228 - -
Lele45g0965 620 Gene3D Transferase(Phosphotransferase) domain 1 521 605 - -
Lele45g0965 620 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Lele45g0965 620 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lele45g0965 620 Pfam Protein kinase domain 350 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0965 620 MobiDBLite consensus disorder prediction 183 197 - -
Lele45g0965 620 ProSiteProfiles Protein kinase domain profile. 344 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele45g0965 620 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 311 421 - -
Lele45g0965 620 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Lele45g0965 620 Gene3D Transferase(Phosphotransferase) domain 1 422 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0965 Lele-ChrLele45 20359696 20364338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0965 101 619 Strubbelig Receptor Gene Family AT4G22130 61.979 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele45g0965 Pkinase 2.3e-29 CL0016