Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele45g0959 ATGGCGATTCTGGAGCGACTTGTGAGAACTTCTCGGCTATGGCGTTCAATTTCCTCCCCTAATACTCTAACTCATTCTGCTCGCTCCCGCCACATTTCCCGCCCTTTCTCTCACAAATCTGCGTTTTCGTCTGAGATTTTCAGTTCTAGAGGTCTACCTGATGCTGCGGGACCGTATTCGTTGTTTCCAGTTGTGTTAGCTGGTATTTTTGGGGTTGGAGTTCTAGAAATGGCATACGCGGATGCTAACGAGTCTGCAGATGAGGGTAGGAAAGAGACTGCCAAGACTGAACTTTCCTCGTCATCAGCCCTGCCTTCAAGTCATAAGGATTTGGAAGGAATTGCCAAGAAATTAAGGTCCCGAATAATGCTGAAACTTGTAAATAGAGGACTTTCAGCTGCTTCTCATCCTGATTTCACTGTTTCTGTTAAAGGTCAAAAGGTCAGCATCAAGTTCCAAATTCCTCCGGCATGTGAAGTTTCCCACCTTCTTGCCAATCTTGTTTCCCAACTTGGAGTGAAGGCTGAGGAGAATGGGGGTGGTTCGAATATGTTAATCCATGCTTGGGACAGCACTGTTGCATGGCAACTTACCCTTAGTCGTCCACCAAAGCAAAAGGATATACAAGGGAATCCAGGTGATGAAGATCTATGCATACTCATATATTATCCTATCATCAGCCCCGACAAAGCTGAGATTGAATTCATTAAGAATGGGAGCCTGAGTACTGAAGAGCTTGATGCTTTTGTGACCATTTTAGAAATAGCTGGCAAAAAGTTGGGACAAAGAAGAACCCCATCTAGGAGACCAAGGGGAGAGACAGAAAAGGTTCCATCTGTAGAGAAATCTATATCAAGTCTTGAATCAATGGGAGTGAGAATTTATGGACTCAGTGAACCTCAAACGGGTATCTCAAATGGTGAGATGTCTTGGGACAACATTGCTGGTTATGATAACCAGAAAAGAGAAGTAGAAGATACAATTCTATTAGCTTTACAAAGACCTGAAGTATATGATGATATTGCTCGTGGGACTCGTCATAAGTATGAGACAACCAGGCCACGAGCTGTGCTTTTTGAAGGTCCACCAGGTACGGGGAAAACTTCTTGTGCTCGTGTTATTGCTAGTCAAGCGGGTGTCCCATTGCTGTATGTACCACTGGAGGTAGTCGTGTCCAAATACTATGGTGAAAGTGAGCACTTGCTAGGGAAAGTTTTCTCTCTTGCAAACGAACTTCCCAAGGGTGCTCTTATTTTTCTGGACGAGATTGATTCTTTTGCTGCTGCCCGTGATAGGGAAATGCATGAAGCTACACGCAGGATATTGTCAGTATTATTGCGACAGATTGATGGGTTTGAGCAAGATAAGAGAGTGATTGTCATTGGTGCTACAAACAGAAAGCAAGACCTTGATCCAGCACTAATCAGTCGGTTTGATACTATGATCACTTTTAACCTGCCTGATCATGATAACCGTAAGGAAATAGCATCCAAATATGCCAAGCACCTTACAAAACCAGAATTAGATGAACTTGCAAGAGTTACAGAAGGTATGTCTGGAAGAGACATTAGAGATGTTTGCTTGCAAGCTGAAAGGTTCTGGGCATCCAAGATTATTCGAGGAAAAGTATCTAAAGATGGAGATGAAGCTTGTCTTCCACCTCTGCAAGAATATATGGATAGTAGCTCCAATAGGCGAAAAGCATTGCTTAGTGCCGCAGCAAATCAGAAATTCCCAAGTTCTTCTTCCATTGGCAAAGGAAGCCAGCTTGATCTGATTTGA 1782 0.4343 MAILERLVRTSRLWRSISSPNTLTHSARSRHISRPFSHKSAFSSEIFSSRGLPDAAGPYSLFPVVLAGIFGVGVLEMAYADANESADEGRKETAKTELSSSSALPSSHKDLEGIAKKLRSRIMLKLVNRGLSAASHPDFTVSVKGQKVSIKFQIPPACEVSHLLANLVSQLGVKAEENGGGSNMLIHAWDSTVAWQLTLSRPPKQKDIQGNPGDEDLCILIYYPIISPDKAEIEFIKNGSLSTEELDAFVTILEIAGKKLGQRRTPSRRPRGETEKVPSVEKSISSLESMGVRIYGLSEPQTGISNGEMSWDNIAGYDNQKREVEDTILLALQRPEVYDDIARGTRHKYETTRPRAVLFEGPPGTGKTSCARVIASQAGVPLLYVPLEVVVSKYYGESEHLLGKVFSLANELPKGALIFLDEIDSFAAARDREMHEATRRILSVLLRQIDGFEQDKRVIVIGATNRKQDLDPALISRFDTMITFNLPDHDNRKEIASKYAKHLTKPELDELARVTEGMSGRDIRDVCLQAERFWASKIIRGKVSKDGDEACLPPLQEYMDSSSNRRKALLSAAANQKFPSSSSIGKGSQLDLI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele45g0959 593 MobiDBLite consensus disorder prediction 261 282 - -
Lele45g0959 593 SMART AAA_5 353 488 IPR003593 -
Lele45g0959 593 Pfam ATPase family associated with various cellular activities (AAA) 357 485 IPR003959 GO:0005524|GO:0016887
Lele45g0959 593 ProSitePatterns AAA-protein family signature. 458 477 IPR003960 GO:0005524|GO:0016887
Lele45g0959 593 CDD AAA 350 486 - -
Lele45g0959 593 MobiDBLite consensus disorder prediction 88 107 - -
Lele45g0959 593 Gene3D - 308 486 IPR027417 -
Lele45g0959 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 309 539 IPR027417 -
Lele45g0959 593 Gene3D - 487 542 - -
Lele45g0959 593 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 299 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele45g0959 Lele-ChrLele45 20296141 20302465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele45g0959 308 530 Calmodulin-binding Proteins AT3G56690 32.609 6.30e-27 114